TCONS_00067798-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00067798-protein
Unique Name	TCONS_00067798-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	402

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00067798-protein ID=TCONS_00067798-protein|Name=TCONS_00067798-protein|organism=Clytia hemisphaerica|type=polypeptide|length=402bp
MASSTELVMSQQNSLASPNDKDSQNMLSKQTTISLRAIESNASTASQDQQ
EGIISNLSSLRFDSGISGRERELLFLRKRSQMITVNHVAHAVFTVSILSE
IRRQLYIQQNPPSNDKEIKKMKQQKVGRIKVGVIGCGRLGIHLVKSLLEY
TPLMSEDIKLSTKRPGALVEDFTSLGVECKQDNKYAASEVDVLFFTFPPN
QIVKVATEIKGHLSPGCLVYTVLTGLSASRIAGLIEHDLVYKPCYVYCKE
EYAIEKEWSYGLSIVGCLAINDFKQLTIPLVPLEDLAARVIQVDRTLIQC
VFIQALNLCHTYANKFLGINERYKLANHILFRGETGYAHDFLKQIKLPLN
KEGYFKITEMLKNGEHRPLKLTDDSRKFCTLFAKHYKLIFDRWLDWTEFS
KD

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_042344	XLOC_042344	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00067798	TCONS_00067798	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR028939	P5C_Rdtase_cat_N
IPR016040	NAD(P)-bd_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028939	Pyrroline-5-carboxylate reductase, catalytic, N-terminal	PFAM	PF03807	F420_oxidored	coord: 130..219 e-value: 4.5E-8 score: 33.5
None	No IPR available	GENE3D	3.40.50.720		coord: 125..269 e-value: 3.6E-13 score: 49.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
IPR016040	NAD(P)-binding domain	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 130..238

Blast

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BLAST of TCONS_00067798-protein vs. Swiss-Prot (Human)
Match: NXRD1 (NADP-dependent oxidoreductase domain-containing protein 1 OS=Homo sapiens GN=NOXRED1 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 5.569e-29
Identity = 74/257 (28.79%), Postives = 124/257 (48.25%), Query Frame = 0

Query:   53 IISNLSSLRFDSGISGRERELLFLRKRSQMITVNHVAHAVFTVSILSEIRRQLYIQQNPPSNDKEIKKMKQQKVGRIKVGVIGCGRLGIHLVKSLLEYTPLMSEDIKLSTKRPGALVEDFTSLGVECKQDNKYAASEVDVLFFTFPPNQIVKVATEIKGHLSPGCLVYTVLTGLSASRIAGLIEHDLVYKPCYVYCKEEYAIEKEWSYGLSIVGCLAINDFKQLTIPLVPLEDLAARVIQVDRTLIQCVFIQALNLC 309
            ++ +L SL+F+ G+   +R  L+L+ RS+ + +   AHA F   +L  +R  L   +N  S    I  +        KVG+IG G LG  L  +LL+  P+ +E +++ST+RP  L E    LG++C   N    S  DV+F    P+Q+  +  EI   L    +VY+ +  +   R+  L+ H  + +P Y Y ++  ++   W     ++  L      Q T P  P     A  I ++   ++ VF  ALN+C
Sbjct:    3 MLQDLESLQFEYGVPEEDRIWLYLQGRSRGLMIEACAHATFFCKLLYNLRASL--NKNQSSRHLSIGSLNSATPEEFKVGIIGGGHLGKQLAGTLLQLGPIPAESLRISTRRPETLGE-LQKLGIKCFYHNADLVSWADVIFLCCLPSQLPNICVEIYTSLEKASIVYSFVAAIPLPRLKLLLNHTNILRPQYQYDEDSVSV---WGANKGVIAALQDPTILQATCPYSP-----AGGIILNIKWLEGVFYAALNIC 248

The following BLAST results are available for this feature:

BLAST of TCONS_00067798-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00067798-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NXRD1	5.569e-29	28.79	NADP-dependent oxidoreductase domain-containing pr...	[more]

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TCONS_00067798-protein (polypeptide) - C. hemisphaerica