TCONS_00068112-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068112-protein
Unique NameTCONS_00068112-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length869

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068112-protein ID=TCONS_00068112-protein|Name=TCONS_00068112-protein|organism=Clytia hemisphaerica|type=polypeptide|length=869bp
MKVLVFVAIVSCLAGAKGYVDQYDRRFMRRLAAFDDDVEHIPEYDYQRSP
RKTFESDDNGNYAYDILDDQDEGENEERANERSVYRRGGYRIVNDDTRQQ
RRYSSIPDQVKDYLMRRRYEDVRTDRRPYYQYSDVESEDGLTSDYYDGIP
FEKRNKANYESLFNMRDIERNAAIEDNKPKTEVMVKRAKVDDGGENGPFS
CGFETDCTKYFQFVGTKLQWKKSTRIPDRKSSHGASMEVDVKKTNTRKDR
ASMSYKFNVRHAAQCNEFYYNMFDEEGCDVVRLLVTMQCDGENKPTELFR
KSWNEKGGWNRVLMNIKKTPGTICTITWRASQSLSPEGRLNLDDITMYNR
ACPKPNEVEIPSAASCTLEGNTCEWKETGLKWSYSNKTTPTLYTGPDLYY
GKKVGPKYAFLEASGSNFPSVKGVLTSRKLKGDTDNCFRMMAYMYGEDLG
TLQVSFKSPNVTDKVVYERKGDQGKRWFEAFVTIPANTETQIEIKGVTGT
GPRSDIAIDDILVEPGNCDEQGELVGCSYDVAGSNDLCHFTGNPNCGEVE
INIPNLGEAKQNRLVQIIPYQAKDFEISFDVQPGDKSSGYASLVHLTTGS
DCCGRGSRHPAIYFHPNTLRVMVCTTEAVGGHRCIIMPRDIPTGQTSHVQ
YTFKENPSTPGRGVCELFVNGQKIGALNVYTAEFPNVKIFSGDIQKQPVN
NKHIITNFFYKNTAKVESCTKTCTANVIKTKVNKKEVTVAKYNKTQCPVS
FENEIEIPLSIRNGRLACMAFDYLIGQNKKGNAECEIKVQYREFVSNRWV
AKPVHTFKDKFEFNVWMPFRRDFDVILEENKKYRIGVIHKLTDQCPEISF
ANMKLLDGPCALPETHQEH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042523XLOC_042523Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068112TCONS_00068112Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000998MAM_dom
IPR013320ConA-like_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000998MAM domainSMARTSM00137MAM_2coord: 361..520
e-value: 1.6E-16
score: 70.9
IPR000998MAM domainPFAMPF00629MAMcoord: 366..518
e-value: 2.8E-24
score: 85.7
coord: 201..353
e-value: 2.9E-9
score: 36.9
IPR000998MAM domainPROSITEPS50060MAM_2coord: 364..520
score: 21.853
IPR000998MAM domainPROSITEPS50060MAM_2coord: 199..354
score: 13.29
IPR000998MAM domainCDDcd06263MAMcoord: 366..518
e-value: 1.93602E-27
score: 109.004
NoneNo IPR availableGENE3D2.60.120.560coord: 513..714
e-value: 0.0031
score: 16.9
NoneNo IPR availableGENE3D2.60.120.200coord: 196..352
e-value: 5.0E-12
score: 45.7
NoneNo IPR availableGENE3D2.60.120.200coord: 361..512
e-value: 2.5E-28
score: 98.6
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 198..352
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 364..518

Blast
[Close]
BLAST of TCONS_00068112-protein vs. Swiss-Prot (Human)
Match: MAMC2 (MAM domain-containing protein 2 OS=Homo sapiens GN=MAMDC2 PE=2 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 2.606e-18
Identity = 66/220 (30.00%), Postives = 99/220 (45.00%), Query Frame = 0 
Query:  306 KGGWNRVLMNIKKTPGTICTITWRASQSLSPEGRLNLDDITMYNRACPKPNEVEIPSAASCTLEGNTCEW---KETGLKWSYSNKTTPTLYTGPDLYYGKKVGPKYAFLEASGSNFPSVKGVLTSRKLKGDT-DNCFRMMAYMYGEDLGTLQVSFK-SPNVTDKVVYERKGDQGKRWFEAFVTIPANTETQIEIKGVTGTGPRSDIAIDDILVEPGNCDE 520
            +G W +  +  KK P     +     +S    G + LDDIT+   +C    ++  P    CT E + C +   K     W      TPT YTGP   +   VG  Y ++EAS   +   K  L SR L+G +  +C     +MYG   G L V  K   +  + +++ R+G+Q   W  A +      + QI  + + G   RSDIAIDD+  + G C E
Sbjct:  451 RGVWMQAEITFKK-PMPTKVVFMSLCKSFWDCGLVALDDITIQLGSCSSSEKLP-PPPGECTFEQDECTFTQEKRNRSSWHRRRGETPTSYTGPKGDHTTGVG-YYMYIEASHMVYGQ-KARLLSRPLRGVSGKHCLTFFYHMYGGGTGLLSVYLKKEEDSEESLLWRRRGEQSISWLRALIEYSCERQHQIIFEAIRGVSIRSDIAIDDVKFQAGPCGE 666
The following BLAST results are available for this feature:
BLAST of TCONS_00068112-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MAMC22.606e-1830.00MAM domain-containing protein 2 OS=Homo sapiens GN... [more]
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