Ubiquitin domain containing protein (polypeptide) - C. hemisphaerica

Overview
NameUbiquitin domain containing protein
Unique NameTCONS_00068155-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length374

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068155-protein ID=TCONS_00068155-protein|Name=Ubiquitin domain containing protein|organism=Clytia hemisphaerica|type=polypeptide|length=374bp
MADIVPKGLSDLLNLKIVLTPSDPSINTGKPLPVLDLDSLHKYSLHWVSS
DGNNNSAAAPSTSLPGQRNLATNAPPTGSPAQRGLATNIPTAQAAISGQR
NLASKSPSVSNPGQSNASGDITLTVKTLTGKSTMVKVKPDSQISDVKDSI
RSSDGLGLTQGLKLLHLNKNLKDEATLKDSFITENATLFMIISAETVAPA
FYMNAETFLHPKYDYQYGAADKTQFSRGNRRFIRPCGWMKKALRVLGKYE
NNTWLGVAGRQSETQSAGGEWPVAYHGTKKGDVEKLCRERSRNPVHQGQN
FTPGKGIYTTSSPHLAEQQSESFDFEGHKYKMIFMDRVDMSYTAEYKVPS
GGQDTYFITSEERVRPYCILFKKV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042541XLOC_042541Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068155TCONS_00068155Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-rel_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 121..193
e-value: 1.5E-9
score: 47.7
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 123..193
e-value: 8.1E-10
score: 38.2
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 121..193
score: 11.529
NoneNo IPR availableGENE3D3.90.175.10coord: 250..363
e-value: 1.0E-8
score: 34.6
NoneNo IPR availableGENE3D3.10.20.90coord: 98..195
e-value: 5.3E-14
score: 51.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..85
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 108..194

Blast
The following BLAST results are available for this feature:
BLAST of Ubiquitin domain containing protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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