TCONS_00068170-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068170-protein
Unique NameTCONS_00068170-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1797

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068170-protein ID=TCONS_00068170-protein|Name=TCONS_00068170-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1797bp
MTNCERSLGWVKMERNSVLIQDRNSVIFQDSMDGIRTLSSGKKKLYLNHV
QFNSIEDGRKFQSQGMKNYGLEWVLETFKKKNCTHYVHNPNSKRENTCYC
GRQKCDHQHTRVKFDHPEKLYWNYKNHCCQSKTNAYGEIVFQGTGKKTRA
KYIRISDETSPSNIVKLFRKVWMMEYPQLLISVTGGAKAFKLNPKLKAHF
TEGLLKVVQTTCTWVVTGGTNTGVMKHVGEALQGATTNVYCIGIATWGIV
NDRKRLKNLENDSAATVDYHVSNSLTTRGACLDNNHSHFLLVDKGSIEQY
GHEIGLRGKVEQAVCCMKIEKNRDRVPGVQLVLEGGPNTIETVLTAVNSE
PPMPVVVIKGSGRAADLIAAAHQLTRGEGPIFEMQEVVERKNLLQMIEKV
FSGMSNKKHQDIFKNLLKCVEKKEYITIFKMEEGANIDEAILTAFMKGEN
ISPFEQLDLAMLWNRVDIARNNIFCDDGNWTIEELHTSMYNALRRNKPEF
VQLLLENGVVMRYFLTTTKLEDLYQYRLREENSVSRRLFNLVMNKSSGSV
KMHHVDLVLKKLCRGINIRSDEYRHHTIANEIVMIREKPDIRDPVNELFI
WAVLCNLKSMTMMLWKHGDESMAKALVGRRLFMAIRDIAMKFQKQDDIIQ
ELESQAEKFGQLAIDLLNEAFQLNEKTAGDLVTCNLVNWGNQTCLSLGVL
SHLLGFVAHPCVQSLLNEKWTDALQFTGSPFKQVLVGLLCPLYVMRLNFK
SLKEYKLILLTETEFKQVEDEEQTREQEIEQIKTETRRKQSKNSLKSAQI
VHEDSLELVSFDSPNRSFEMTSNERVIEETFEMPWYMKYPKFFQAPVTKF
VANFIAYLFFLGLFMFVITTELNKEPYTTEWILVIMVVSYTMEEIRQIAE
SDAQTFRHKIQMWSVSYWNLCDALAILLFFTALILRLHGSETLLLGHVLY
AVDIIFWILRILDMFGVNKHIGPYVVMIGKMTIDLVNFLFVLVVFTLAYG
VSRYAILNPYTKRSWSTLYKLVMIPYFQIYGELFLEYPQEDPNKTIFETP
THDHEYIQVVAAIIMAIYLLVANVLLINLLIAIFNNTYTQVQANSNEIWK
FQRYRLIQEYSARSAFFPPLSIIVHVYLFFRWLVNRSFSSTVRGKHADRR
LKKFLNKDDLHDVILFEEKCLASYLRRQNSIYSASNEEKLRIINDRLDGV
SKVAERYIIDSTTTNQGNSTHLNNLKERMDNLEEIMRTMMVKLTDVHSTL
HYGNAPSTMHHSNVSRRPSSQPPNQQNNYHRSISEFHTLGGGGAAFHPPT
TPCSLPVGVNGDRRSSATSLNLPSTPTGGTYPNRRADRSSFVRRAAHNFK
RPSLKARPSASRAASNQRQDSPSKKGSFSRAISMDESASFKKRSSTRRRT
LSDVNRPEVKINDHVQILSPIISEIRPRDFEASSPMISKGDPSERQKQGS
HPTLQRTQQVVEDDENDDITYTGDEGFFVEGYGEYNDEDLMIPEEILNIL
SRCPSYPFSDVQREFVPDIKVPWNIPMDDYSPPSYTSPTVSSYLPWVDPD
PQSDKFRKIGFNMSERKSCCGTYELNGDGVPRNPVGRTGLEGRGLLCHYG
PNHLQFALITRWKKNMDGMGYPNQLELLVIVQKNSKLSLPNGPEVLNNSM
SPELLRFFSKTTLISKGVDISTCDSVWIGLNKIIDKREKIWEGYMDDRRN
TDHAWIEATVFNYHDPDGNIISQFISEPPSDEEAAKSSKKMYQWKDVCID
PRXHQVTKKQRRAQRRCINGKMSVLIHVCWSMAIVMVKLLSWSGLIS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042548XLOC_042548Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068170TCONS_00068170Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005821Ion_trans_dom
IPR015797NUDIX_hydrolase_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0005216ion channel activity
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006811ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006811 ion transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0005216 ion channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1215..1242
NoneNo IPR availableCOILSCoilCoilcoord: 765..788
NoneNo IPR availableCOILSCoilCoilcoord: 649..669
NoneNo IPR availableGENE3D1.20.120.350coord: 756..970
e-value: 3.1E-4
score: 19.5
NoneNo IPR availableGENE3D3.40.50.450coord: 166..398
e-value: 2.9E-18
score: 65.6
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 854..1094
e-value: 8.0E-14
score: 51.3
IPR015797NUDIX hydrolase domain-likeSUPERFAMILY55811Nudixcoord: 1498..1615

Blast
BLAST of TCONS_00068170-protein vs. Swiss-Prot (Human)
Match: TRPM3 (Transient receptor potential cation channel subfamily M member 3 OS=Homo sapiens GN=TRPM3 PE=2 SV=4)

HSP 1 Score: 702.975 bits (1813), Expect = 0.000e+0
Identity = 431/1271 (33.91%), Postives = 674/1271 (53.03%), Query Frame = 0
Query:   73 WVLETFKKKNCTHYVHNPNSKRENTCYCGRQKCDH--------------QHTRVKFDHPEKLYWNYKNHCCQSKTNAYGEIVFQGTGKKTRAKYIRISDETSPSNIVKLFRKVWMMEYPQLLISVTGGAKAFKLNPKLKAHFTEGLLKVVQTTCTWVVTGGTNTGVMKHVGEALQGATTN----VYCIGIATWGIVNDRKRLKNLENDSAATVDYHVSNSLTTRGACLDNNHSHFLLVDKGSIEQYGHEIGLRGKVEQAVCCMKIEKN--------------------------RDRVPGVQLVLEGGPNTIETVLTAVNSEPPMPVVVIKGSGRAADLIAAAHQLTRGEGPIFEMQEVVERKNLLQMIEKVFSGMSNKKHQDIFKNLLKCVEKKEYITIFKM--EEGANIDEAILTAFMKGENISPFEQLDLAMLWNRVDIARNNIFCDDGNWTIEELHTSMYNALRRNKPEFVQLLLENGVVMRYFLTTTKLEDLYQYRLREENSVSRRLFNLVMNKSSGS------VKMHHVDLVLKKLCRG---INIRSDEYR--HHTI------------------------------ANEIVMIREKPDIRD---PVNELFIWAVLCNLKSMTMMLWKHGDESMAKALVGRRLFMAIRDIAMKFQKQDDIIQELESQAEKFGQLAIDLLNEAFQLNEKTAGDLVTCNLVNWGNQTCLSLGVLSHLLGFVAHPCVQSLLNEKWTDALQFTGSPFKQVLVGLLCPLYVMRLNFKSLKEYKLILLTETEFKQVEDEEQTREQEIEQIKTETRRKQSKNSLKSAQIVHEDSLELVSFDSPN--RSFEMTSNERVIEETFEMPWYMKYPKFFQAPVTKFVANFIAYLFFLGLFMFVITTELNKEPYTTEWILVIMVVSYTMEEIRQIAESDAQTFRHKIQMWSVSYWNLCDALAILLFFTALILRLHGSETLLLGHVLYAVDIIFWILRILDMFGVNKHIGPYVVMIGKMTIDLVNFLFVLVVFTLAYGVSRYAILNPYTKRSWSTLYKLVMIPYFQIYGELFLEYPQEDPNKTIFETPTHDHEYIQV--------VAAIIMAIYLLVANVLLINLLIAIFNNTYTQVQANSNEIWKFQRYRLIQEYSARSAFFPPLSIIVHVYLFFRWLVNRSFSSTVRGKHADRRLKKFLNKDDLHDVILFEEKCLASYLRRQNSIYSASNEEKLRIINDRLDGVSKVAERYIIDSTTTNQGNSTHLNNLKERMDNLEEIMRTMMVKL 1243
            W+   F K+ C H +  P++K  + C CGR    H                +R+  +  +   W+   H   S T+A+G I FQG G   +A Y+R+S +T P  ++ L  K W +E P+LLISV GG + F+L PKLK  F +GL+K   TT  W+ TGG NTGV++HVG+AL+   +     +  IGIA WGIV +++ L   +        Y   ++  ++   L++ HSHF+L D G+  +YG E+ LR ++E+ +   KI                                VP V L++EGGPN I  VL  +   PP+PVVV  GSGRA+D++A  H+ +   G I E      R  LL  I+K F+  +  + Q +F  L++C++KKE IT+F+M  E   +ID AILTA +KG N S  +QL LA+ WNRVDIAR+ IF     W +  L  +M +AL  ++ +FV+LL+ENGV M  FLT ++LE+LY  R    N+    L++LV +   G+      + +  + LV++ L  G    N     +R  +H +                                E+ +  + P+I     P +EL +WAVL   + M +  W+HG+E+MAKALV  +L  A+   A +    DDI QEL   +  FGQLA++LL+++++ +E+ A  L+T  L NW N TCL L V +    F+AH C Q LL + W   L+   +   +V++G+L P  ++ L FK+  +   +               ++ QEI       + K+++   K  +   E+ +EL +    N   S      E V  +   +P   K  +F+ AP+ KF    +AY+ +L LF +++  ++ + P T EWI++  + +  +E++R+I  S+      K+++W   YWN+ D +AILLF   +ILRL        G V+Y V+II+W +R+LD+FGVNK++GPYV+MIGKM ID++ F+ +++V  +++GV+R AIL P  + SW     +  +PY+ IYGE+F +  Q DP     ET   D + IQ+        +   IMA YLLVAN+LL+NLLIA+FNNT+ +V++ SN++WKFQRY+LI  +  R    PPL I  H+ + F+ L  R           D  LK F+  D+L  V  FEE+C+  Y R ++  +++SN+E++R+ ++R++ +S   E    +           L  +  R+  LE+++  M   L
Sbjct:   64 WIERAFYKRECVHII--PSTKDPHRCCCGRLIGQHVGLTPSISVLQNEKNESRLSRNDIQSEKWSISKHTQLSPTDAFGTIEFQGGGHSNKAMYVRVSFDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQPKLKQVFGKGLIKAAMTTGAWIFTGGVNTGVIRHVGDALKDHASKSRGKICTIGIAPWGIVENQEDLIGRD----VVRPYQTMSNPMSKLTVLNSMHSHFILADNGTTGKYGAEVKLRRQLEKHISLQKINTRCLPFFSLDSRLFYSFWGSCQLDSVGIGQGVPVVALIVEGGPNVISIVLEYLRDTPPVPVVVCDGSGRASDILAFGHKYSEEGGLINESL----RDQLLVTIQKTFT-YTRTQAQHLFIILMECMKKKELITVFRMGSEGHQDIDLAILTALLKGANASAPDQLSLALAWNRVDIARSQIFIYGQQWPVGSLEQAMLDALVLDRVDFVKLLIENGVSMHRFLTISRLEELYNTRHGPSNT----LYHLVRDVKKGNLPPDYRISLIDIGLVIEYLMGGAYRCNYTRKRFRTLYHNLFGPKRPKALKLLGMEDDIPLRRGRKTTKKREEEVDIDLDDPEINHFPFPFHELMVWAVLMKRQKMALFFWQHGEEAMAKALVACKLCKAMAHEASENDMVDDISQELNHNSRDFGQLAVELLDQSYKQDEQLAMKLLTYELKNWSNATCLQLAVAAKHRDFIAHTCSQMLLTDMWMGRLRMRKNSGLKVILGILLPPSILSLEFKNKDDMPYM---------------SQAQEIH-----LQEKEAEEPEKPTKEKEEEDMELTAMLGRNNGESSRKKDEEEVQSKHRLIPLGRKIYEFYNAPIVKFWFYTLAYIGYLMLFNYIVLVKMERWPSTQEWIVISYIFTLGIEKMREILMSEPGKLLQKVKVWLQEYWNVTDLIAILLFSVGMILRLQDQPFRSDGRVIYCVNIIYWYIRLLDIFGVNKYLGPYVMMIGKMMIDMMYFVIIMLVVLMSFGVARQAILFPNEEPSWKLAKNIFYMPYWMIYGEVFAD--QIDPPCGQNET-REDGKIIQLPPCKTGAWIVPAIMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRYQLIMTFHERPVLPPPLIIFSHMTMIFQHLCCRWRKHESDPDERDYGLKLFITDDELKKVHDFEEQCIEEYFREKDDRFNSSNDERIRVTSERVENMSMRLE----EVNEREHSMKASLQTVDIRLAQLEDLIGRMATAL 1292          
The following BLAST results are available for this feature:
BLAST of TCONS_00068170-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRPM30.000e+033.91Transient receptor potential cation channel subfam... [more]
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