TCONS_00068313-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068313-protein
Unique NameTCONS_00068313-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length827

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068313-protein ID=TCONS_00068313-protein|Name=TCONS_00068313-protein|organism=Clytia hemisphaerica|type=polypeptide|length=827bp
MRLDVLRAYRPVRIHAHVQHSFKMACTNMDEFRKIHNHQLKSIGFPNELV
QNLYNQLANDDTSSPKIIDTFQVKKSGNTRPLLLAKKSIKKESCFFLLEH
IWTNDGGSKAAEQLHKSPILSTKLSQMFNLPDMGSIDEYYNYDTQKNTVI
DVTGCAEDAAKKACDEYKGQTVESIIKCLDKDTPDLQNKIGTDIENITFE
EFVSGLKTTGSMPENASEGFLRKMYDNFSRDKEGSASTLNYNWEDENDIV
SVYIPIPLTAKKNNIKSALTTNTWKLFVDGKEMLNGELFARVKADDSYWA
IEQPGVLCMTLEKVLTDETWKALLKGEEKLSAEAIIQTAWAKHQVEDIYY
NGILDTMWKYNQTYSLSSPDSKARHPQWYIMEEIGSSLTHNNNPNFKCSP
FFYSALGRAYSIIWPIKDIKEGQMCTRNFIPQIIANETMDICKVRLKTHT
DIKLTDGNNNKFHAENEEQPSEIEPVNVEKLXDTEKEEQPSEIEPVNVEK
LSTKKISKSDEERLVWLGDYNGFVSDEVAKSLPNVTFATESDPKCVVKFI
SLNKTSVSIEGEILPCGEMLANKDYLQNYIKLRYGNQPWFVSSFILPNAL
VEFNEKYEETDLLQYWIVRPVDNRQLALENFVTSQFARIVRVCEAGSIAV
SQYITDQIPFRDRLVTLSYPVMLCTDIKCAYISKEPALRFSKDESYPTSF
IDEYKNHSSVTQEFEGAQADDLFSDYKVAMNKLLLPQDPDKGWSYVEEQI
YQAIGQVSKALAKDMRLPATGDCKNYVMCNFDVIVDSSLQPKIIDIVGHG
ELPRKLIIGDFVTLALGGSKDSFVKVN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042631XLOC_042631Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068313TCONS_00068313Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR007052CS_dom
IPR004344TTL/TTLL_fam
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006464 cellular protein modification process
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 225..339
e-value: 2.8E-17
score: 62.3
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 235..332
IPR007052CS domainPFAMPF04969CScoord: 240..313
e-value: 2.5E-8
score: 34.7
IPR007052CS domainPROSITEPS51203CScoord: 236..324
score: 11.517
IPR004344Tubulin-tyrosine ligase/Tubulin polyglutamylasePFAMPF03133TTLcoord: 571..796
e-value: 1.1E-5
score: 24.6
NoneNo IPR availableCDDcd06467p23_NUDC_likecoord: 241..324
e-value: 3.79083E-16
score: 74.121

Blast
[Close]
BLAST of TCONS_00068313-protein vs. Swiss-Prot (Human)
Match: TTL12 (Tubulin--tyrosine ligase-like protein 12 OS=Homo sapiens GN=TTLL12 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 1.981e-24
Identity = 113/481 (23.49%), Postives = 210/481 (43.66%), Query Frame = 0 
Query:  353 ILDTMWKYNQTYSLSSPDSKARHPQWYIMEEIGSSLTHNNNPNFKCSPFFYSALGRAYSIIWPIKDIKEGQMCTRNFIPQIIANETMDICKVRLKTHTDIKLTDGNNNKFHAENEEQPSEIEPVNVEKLXDTEKEEQPSEIEPVNVEKLSTKKISKSDEERLVWLGDYNGFVSDEVAKSLPNVTFA---TESDPKCVVKFISL---NKTSVSIEGEIL---PCGEMLANKDYLQNYIKLRYGNQ--PWFVSSFILPNALVEFNEKYEETDLL---QYWIVRPVDNRQLALENFVTSQFARIVRVCEAGSIAVSQYITDQIPF-RDRLVTLSYPVMLCTDIKCA-----YISKEPALRFSKDESYPTSFIDEYKNHSSVTQE-----FEGAQADDLFSDYKVAMNKLLLPQDPDKGWSYVEEQIYQAIGQVSK-ALAKDMRLPATGDC---KNYVMCNFDVIVD--------SSLQPKIIDI 796
            +L+ MWK+NQTY L+   ++ + P WYIM+E GS + H + P+F  +PFFY     AY+++WP++D+  G+  TR+F           I K  L       + D ++        E P+E    + + + +  KE+ P +I PV        K+    +               +VA SL +  F    +E+D   +  F       K S    G +L   PC  +L  KD L +  +   G +  PW   +F L   L +F   +++ +      +WI +P  N   +L+  VT     I+R  E+    VS+YI   + F R+ +  + + +     ++       ++     LRFS + ++  + +D+Y+ H +V         +    ++   +++         Q P+  W+ V+ +I++A  ++ + A AK    P  G C    +  M   D+++           +QP+I+++
Sbjct:  166 VLEEMWKFNQTYQLAHGTAEEKMPVWYIMDEFGSRIQHADVPSFATAPFFYMPQQVAYTLLWPLRDLDTGEEVTRDF---AYGETDPLIRKCMLLPWAPTDMLDLSSC-----TPEPPAE----HYQAILEENKEKLPLDINPVVHPHGHIFKVYTDVQ---------------QVASSLTHPRFTLTQSEADADILFNFSHFKDYRKLSQERPGVLLNQFPCENLLTVKDCLASIARRAGGPEGPPWLPRTFNLRTELPQFVSYFQQRERWGEDNHWICKPW-NLARSLDTHVTKSLHSIIRHRESTPKVVSKYIESPVLFLREDVGKVKFDIRYIVLLRSVRPLRLFVYDVFWLRFS-NRAFALNDLDDYEKHFTVMNYDPDVVLKQVHCEEFIPEFEK--------QYPEFPWTDVQAEIFRAFTELFQVACAKP---PPLGLCDYPSSRAMYAVDLMLKWDNGPDGRRVMQPQILEV 606
The following BLAST results are available for this feature:
BLAST of TCONS_00068313-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTL121.981e-2423.49Tubulin--tyrosine ligase-like protein 12 OS=Homo s... [more]
back to top