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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00068331-protein ID=TCONS_00068331-protein|Name=TCONS_00068331-protein|organism=Clytia hemisphaerica|type=polypeptide|length=545bp
MDSKNFDKQIEKLTENVEKQMINLTQKLLSQQKEVFQRLDKLEKQANNGR
DDKESIRSGESSETSFTNDQFSNKRNFNITLQEEVCQPRIIQVKSRDNSE
DSSGKISLAPPEQLTARSKKQSFLEENCNIMEEKISSEKQSYAEGLTIHG
ANRIATGGAVSKVIWSILVACSLLTAIMISKEHWESFLSDHSVSNFVITV
EKEIKLPSITICNYAAINRERRHFIDGIPTYKRPLLLSDGSMRLCGQNLT
QCGYNGTTLIKVQNYTADYSSSSLQNHLVDYDDTTNCFTVRGSTQYVPSD
ILSVQAVANRTPFDELWTELYVHPTEETFQEASPTVYWASEGWYHVILDK
KIITRLGLPFTDCVEGKGSYEQNKFKGNYTVTKCKKGCFWEKVFEKCGAI
PQMYKKHMREPRRFDNTTFINNTEMQTCLKEVEGDFSVTEECNRLCKLQP
CYEEDIKLSLDYHKAPSYPNFYELAFTFHTFLVEHIEEKPAYTWQDLFAN
FGGCVGLMTGASILSAFELMIFFGLIVLDFFDLYTKCQTKIHPNP Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001873 | ENaC |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006814 | sodium ion transport |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005272 | sodium channel activity |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006814 |
sodium ion transport |
| cellular_component |
GO:0016020 |
membrane |
| molecular_function |
GO:0005272 |
sodium channel activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 3..45 |
| None | No IPR available | GENE3D | 1.10.287.770 | | coord: 147..311
e-value: 0.21
score: 11.4 |
| None | No IPR available | GENE3D | 1.10.287.770 | | coord: 464..529
e-value: 5.8E-14
score: 51.3 |
| None | No IPR available | GENE3D | 1.10.287.820 | | coord: 355..451
e-value: 1.8E-7
score: 31.2 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 94..119 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 43..70 |
| IPR001873 | Epithelial sodium channel | PFAM | PF00858 | ASC | coord: 142..222
e-value: 1.7E-11
score: 43.7
coord: 244..522
e-value: 2.8E-24
score: 85.8 |
Blast
The following BLAST results are available for this feature:
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