TCONS_00068349-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068349-protein
Unique NameTCONS_00068349-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1138

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068349-protein ID=TCONS_00068349-protein|Name=TCONS_00068349-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1138bp
MDYKDDHLCFFDSDDKYPYLVRRYRKFDDSVDETPSGTKLDQFLNRQKRV
SEFDFAKKRSRRNLETIKEGVGNSKGTKKKFSHIAQALEEDQGIEDDNKF
LFEEAKFSATNVILQLGKLLDIVAERRQEAEENTVQPVSSSILHQTTRSA
DSIVLRRGSTDIIWKFNNNPSSECLLVEHKGLGFYPSEAIIDLLNISYQD
LIKNAQYYAREWQTHTYKHIADSNPKGVESGIFSAPQTAMSGMISNEDGG
NKVKKTKTKPNLTSSNNALTSANASSSPSKIYGASSMNLAPDGGKQRTRR
LTKQKTRIEKFNMLGKEIHETPPSKKKDKEKDKDKDKDSSDTSPKKDDVD
LDDVPAPPINQAMINFAISSRICHEKGWVMQPSMLEDPEHHTLLHWARER
LQEAIRKRVKEEQESYSKNLQEITRRYYGDGKRDVIMKSKHLSKKMADKV
EEKKKKFMTILPDGTQNVYYPNGHLAVTCVSCPNTKRHYVLVYSDTKRVE
RKLLAHFTPSGRGVCYHSNGQIAFISMSKFGCCHAEDGALIDKWKWSMHK
IVPPLTFQLTPYITFRCSNKTMMSLFVNINGENVRFQLGTKEDVPDPNLN
EMGRLMTMEKFTSNIGIQLSRNLQTKIRERKHTRAPKKLQEIKQQHNHSH
HKDPLHPGSKLFPTKSTSATNADHHHHAVKKHSGHDQHHPEHYEQEEMSL
EERLKGIEIKFPGAPKEFKEPEIMPTPYQVDLKTLQTKFKKTASEWLDHY
RVATGISQPSRVNKQNRQRPSTCFPFSSKTSTMFMQRKKGTARAPSAPPQ
TLRDRSTSRTISRVHEMSSRLHDRPNTSIGARRNFSKVSFVSAATSGRRS
TSPDSAIGGSTAPFKCGLLQQQSKITKILPKDGCPIALRQEMNGERNALC
RCDNRKVPYLMDLEFDKYLTSLPKTQLVILSVLASPASGSMTQGDVIIEK
LYKQMNKNRSIPCVQSRHDPYRLFRYSISSNGNKNALLVNRHNVIDGMVM
MYQGGKLLFANFIFDGYGSTKKDFMRQISRTRKEALKGRFLPEDFRFGMD
TKTESSSIALVQQQPAKILRQVSSGVDDDQLLEEASSEKVIAGPQARINI
VVDEWSHSSDTINGGSHHVNHPKEALNRIPTVIFAHRT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042661XLOC_042661Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068349TCONS_00068349Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029281FAM194
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 394..426
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 789..809
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 627..697
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..356
IPR029281FAM194 familyPFAMPF14977FAM194coord: 447..608
e-value: 2.9E-33
score: 114.8

Blast
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BLAST of TCONS_00068349-protein vs. Swiss-Prot (Human)
Match: CC020 (Uncharacterized protein C3orf20 OS=Homo sapiens GN=C3orf20 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 7.459e-28
Identity = 59/175 (33.71%), Postives = 109/175 (62.29%), Query Frame = 0 
Query:  879 LPKDGCPIALRQEMNGE-RNALCRCDNRKVPYLMDLEFDKYLTSLPK--TQLVILSVLASPASGSMTQGDVIIEKLYKQMNKNRSIPCVQSRHDPYRLFRYSISSNGNKNA-LLVNRHNVIDGMVMMYQGGKLLFANFIFDGYGSTKKDFMRQISRTRKEALKGRFLPEDFRFGM 1049
            LP D CP+ LR+ M  E   A C+C   K P + D+E +++L + P+  +Q+++  +++S    S  Q   ++  LY    + R  PC+Q R+D YRL +Y + S   ++  L+V +++V+ GM++M+ GGKL+F   + +GYG +K++ ++QI R++++   G FLP+D++F +
Sbjct:  662 LPSD-CPLVLRKLMLKEDTRAGCKCL-VKAPLVSDVELERFLLA-PRDPSQVLVFGIISSQNYTSTGQLQWLLNTLYNHQQRGRGSPCIQCRYDSYRLLQYDLDSPLQEDPPLMVKKNSVVQGMILMFAGGKLIFGGRVLNGYGLSKQNLLKQIFRSQQDYKMGYFLPDDYKFSV 833
The following BLAST results are available for this feature:
BLAST of TCONS_00068349-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CC0207.459e-2833.71Uncharacterized protein C3orf20 OS=Homo sapiens GN... [more]
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