TCONS_00068387-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068387-protein
Unique NameTCONS_00068387-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length839

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068387-protein ID=TCONS_00068387-protein|Name=TCONS_00068387-protein|organism=Clytia hemisphaerica|type=polypeptide|length=839bp
DIQGLLEGLSTDIKTKIDEKTATISRKDAFKPPPSDRKSSLFTTNEITSL
LSSTELQFDDETNRMSATDLDLTQRTIEAEIRVRQIYLQNHDGLDEKEIE
EVKQKLAILQQRMYRCMTKRGQAIQESKIQLETLDIEQNSSDDEGGYAED
ETNVPMKTDGQMMGKRNLSPEEIEEMDNEQLQNILRHNSVDYNEEESTRE
NLLQLVSERLLSNTSTTSYRSSWEPPDQSTLKWNDASKLSELREQALSDT
SDESELRTPEPDTPLESYFLLNPSDMDNYLHYKAVNHEKLTDWDPTTVLK
ELYGKITQGSRTVTRLPSKSKKVTCMQGYLDKLPMNQTKVRTFKGWKRRF
FQIARGKLYYYEDHKSETPLGSIDILGSEVVAGENNTVNIAARMNGDKLV
IRCGGESERDDWLTNLQRMSIIDTPIPGSLVKEGPTALLAREGSLKKKKN
NKDGTVIIDLGATTIRAGLSSDDVPVVSFPAAFAIKKAEQQRTGRRFTES
GLPDPHTCRCGFEAFYPEIRKDAKIIYPLKPSMKIDKYSIKVRYVPGFLE
KVFRDLELDSKDRVVVISHSRHLSNRDKEILLDYLFGQMNVHAVYMQQQA
LLSLYSYSVTSGLIVDIGDHIDILPVIDGSVIEKGVMCLPYGGQQVTEYL
GKLLTESGYRLFTDIESYVVRYVKEQVAQVSLDFQEDMASSPKAIEVDIE
KFKLPDDRKMIKVGNIKYRCTEGLFNTGLYGKDDLPLHVMVERAIKACEI
DHRRMFCKNVYLAGGTSLINGLSSRLEEEIRTAFPDTVQVKVTGGEDRFN
AAYKGAIVMTGLSNFQELLVNKEEWSNDQSEGLFKRWST
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042676XLOC_042676Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068387TCONS_00068387Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004000Actin
IPR001849PH_domain
IPR011993PH_dom-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004000Actin familySMARTSM00268actin_3coord: 453..838
e-value: 7.4E-72
score: 254.7
IPR004000Actin familyPFAMPF00022Actincoord: 453..828
e-value: 2.2E-56
score: 191.1
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 324..423
e-value: 9.0E-12
score: 55.1
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 327..419
e-value: 1.7E-10
score: 41.2
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 323..421
score: 12.598
NoneNo IPR availableGENE3D3.30.420.40coord: 447..603
e-value: 4.7E-18
score: 65.0
NoneNo IPR availableGENE3D3.30.420.40coord: 716..797
e-value: 9.9E-15
score: 53.5
NoneNo IPR availableGENE3D3.90.640.10coord: 658..715
e-value: 7.5E-16
score: 57.4
NoneNo IPR availableGENE3D3.30.420.40coord: 604..657
e-value: 2.0E-8
score: 33.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..264
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 453..615
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 610..826
IPR011993PH domain-likeGENE3D2.30.29.30coord: 317..421
e-value: 5.5E-16
score: 58.0
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 322..422

Blast
[Close]
BLAST of TCONS_00068387-protein vs. Swiss-Prot (Human)
Match: ACTG (Actin, cytoplasmic 2 OS=Homo sapiens GN=ACTG1 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.727e-46
Identity = 97/373 (26.01%), Postives = 198/373 (53.08%), Query Frame = 0 
Query:  454 GTVIIDLGATTIRAGLSSDDVPVVSFPAAFAIKKAEQQRTGRRFTESGLPDPHTCRCGFEAFYPEIRKDAKIIYPLKPSMKIDKYSIKVRYVPGFLEKVFRDLELDSKDRVVVISHSRHLSNRDKEILLDYLFGQMNVHAVYMQQQALLSLYSYSVTSGLIVDIGDHI-DILPVIDGSVIEKGVMCLPYGGQQVTEYLGKLLTESGYRLFTDIESYVVRYVKEQVAQVSLDFQEDMASSPKAIEVDIEKFKLPDDRKMIKVGNIKYRCTEGLFNTGLYGKDDLPLHVMVERAIKACEIDHRRMFCKNVYLAGGTSLINGLSSRLEEEIRTAFPDTVQVKVTGGEDRFNAAYKGAIVMTGLSNFQELLVNKEEW 825
              ++ID G+   +AG + DD P   FP+     + +    G    +S + D    + G             + YP++  +  +   ++  +   F    + +L +  ++  V+++ +      ++E +   +F   N  A+Y+  QA+LSLY+   T+G+++D GD +   +P+ +G  +   ++ L   G+ +T+YL K+LTE GY   T  E  +VR +KE++  V+LDF+++MA++  +  ++ + ++LPD  ++I +GN ++RC E LF     G +   +H     +I  C++D R+    N  L+GGT++  G++ R+++EI    P T+++K+    +R  + + G  ++  LS FQ++ ++K+E+
Sbjct:    6 AALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI----------LTLKYPIEHGIVTNWDDMEKIWHHTF----YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLE-KSYELPDG-QVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362
The following BLAST results are available for this feature:
BLAST of TCONS_00068387-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACTG1.727e-4626.01Actin, cytoplasmic 2 OS=Homo sapiens GN=ACTG1 PE=1... [more]
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