TCONS_00068624-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068624-protein
Unique NameTCONS_00068624-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length264

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068624-protein ID=TCONS_00068624-protein|Name=TCONS_00068624-protein|organism=Clytia hemisphaerica|type=polypeptide|length=264bp
MNKLKSSQRDKVRQFISFTNTGEKTAIFCLSSHDWRMDIATDNYFQHPER
YFKENSKSSSSDKNRIDKKKILHLFEKYKDPHEDKMLANGLSKFCEDIDL
DPASFEILLICWKFKAAVQCEFTRKEFTDGMLELSVDSLDGLKRKMPSVE
QELTDAAKFRDLYQFTFNFAKNPEQKGLDLEMAIAYWNIVFKGRFKFLEL
WVQFLTENQKHSIPKDTWNLLLDFSNSANDDMSNYDEEDAWPVLIDDFVT
WSKPRIQNKKTTLV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042805XLOC_042805Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068624TCONS_00068624Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005176PONY_dom
IPR009060UBA-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005176Potentiating neddylation domainPFAMPF03556Cullin_bindingcoord: 142..251
e-value: 3.9E-37
score: 127.1
IPR005176Potentiating neddylation domainPROSITEPS51229DCUN1coord: 66..253
score: 52.733
NoneNo IPR availablePFAMPF14555UBA_4coord: 9..49
e-value: 2.4E-10
score: 39.9
NoneNo IPR availableGENE3D1.10.8.10coord: 2..53
e-value: 3.7E-17
score: 61.5
IPR009060UBA-likeSUPERFAMILY46934UBA-likecoord: 5..47

Blast
[Close]
BLAST of TCONS_00068624-protein vs. Swiss-Prot (Human)
Match: DCNL1 (DCN1-like protein 1 OS=Homo sapiens GN=DCUN1D1 PE=1 SV=1)

HSP 1 Score: 348.591 bits (893), Expect = 3.179e-122
Identity = 162/265 (61.13%), Postives = 209/265 (78.87%), Query Frame = 0 
Query:    1 MNKLKSSQRDKVRQFISFTNTGEKTAIFCLSSHDWRMDIATDNYFQHPERYFKENSKSSSSDKNRIDKKKILHLFEKYKDPH-EDKMLANGLSKFCEDIDLDPASFEILLICWKFKAAVQCEFTRKEFTDGMLELSVDSLDGLKRKMPSVEQELTDAAKFRDLYQFTFNFAKNPEQKGLDLEMAIAYWNIVFKGRFKFLELWVQFLTENQKHSIPKDTWNLLLDFSNSANDDMSNYDEEDAWPVLIDDFVTWSKPRIQNKKTTLV 264
            MNKLKSSQ+DKVRQF+ FT + EKTA+ CLS +DW++D+ATDN+FQ+PE Y +E+ K S      +D+KK+  L+ +YKDP  E+K+  +G+ +FC+D+ LDPAS  +L+I WKF+AA QCEF+++EF DGM EL  DS++ LK ++P +EQEL +  +F+D YQFTFNFAKNP QKGLDLEMAIAYWN+V  GRFKFL+LW +FL E+ K SIPKDTWNLLLDFS    DDMSNYDEE AWPVLIDDFV +++P+I   K+T V
Sbjct:    1 MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGS------LDRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVLNGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVLIDDFVEFARPQIAGTKSTTV 259
The following BLAST results are available for this feature:
BLAST of TCONS_00068624-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DCNL13.179e-12261.13DCN1-like protein 1 OS=Homo sapiens GN=DCUN1D1 PE=... [more]
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