TCONS_00068778-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00068778-protein
Unique NameTCONS_00068778-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length386

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00068778-protein ID=TCONS_00068778-protein|Name=TCONS_00068778-protein|organism=Clytia hemisphaerica|type=polypeptide|length=386bp
MEGGKTVSQEEAANKFNLGNEAFVDEDFTTSIKCYTEALELDKENFDYYL
KRCNAYIKISNFSDALSDVNYSIQYNTENSKAWQRKGLVLFSMEKFEEAL
EAYQKALELHGPNEDIQKYIRKCEAEINLTKQGSADQTKISIGLSSLHPT
KESTIKDQGQMKQQEATQPATALKPKIKHDWYQTETHVILTVLAKSLKQE
KVQIEFQSKSLSVTAKLPNGNDYSLELDLAHDIDPKDSRFKVLSTKIEIK
MKKCEGIRWSSLETDNESQFTKNAKATKERTESTSGATSAVDVHKYPSSK
HMYSDWDKLAKQLQEEEKTENMEGDAALNRLFQQIYSDGSDETKRAMNKS
FQESGGTVLSTNWKDIKKEKVEVKPPDCMEYKKYEY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042888XLOC_042888Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00068778TCONS_00068778Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR001440TPR_1
IPR007052CS_dom
IPR008978HSP20-like_chaperone
IPR011990TPR-like_helical_dom
IPR007699SGS_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 12..45
e-value: 0.33
score: 20.0
coord: 46..79
e-value: 69.0
score: 7.6
coord: 80..113
e-value: 5.6E-7
score: 39.2
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 46..79
score: 6.018
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 80..113
score: 11.682
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 12..45
score: 8.319
IPR001440Tetratricopeptide repeat 1PFAMPF00515TPR_1coord: 81..109
e-value: 2.9E-9
score: 36.3
IPR007052CS domainPFAMPF04969CScoord: 178..253
e-value: 1.7E-17
score: 64.1
IPR007052CS domainPROSITEPS51203CScoord: 174..263
score: 18.553
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 174..328
e-value: 1.1E-25
score: 89.7
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 167..267
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 94..139
e-value: 2.2E-6
score: 27.2
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 3..93
e-value: 4.6E-18
score: 64.8
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 10..128
IPR007699SGS domainPFAMPF05002SGScoord: 305..384
e-value: 1.2E-33
score: 115.0
IPR007699SGS domainPROSITEPS51048SGScoord: 295..386
score: 32.365
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 270..290
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 12..113
score: 22.196

Blast
[Close]
BLAST of TCONS_00068778-protein vs. Swiss-Prot (Human)
Match: SGT1 (Protein SGT1 homolog OS=Homo sapiens GN=SUGT1 PE=1 SV=3)

HSP 1 Score: 253.447 bits (646), Expect = 1.867e-81
Identity = 158/377 (41.91%), Postives = 222/377 (58.89%), Query Frame = 0 
Query:   16 FNLGNEAFVDEDFTTSIKCYTEALELDKENFDYYLKRCNAYIKISNFSDALSDVNYSIQYNTENSKAWQRKGLVLFSMEKFEEALEAYQKALELHGPNEDIQK-YIRKCEAEINLTKQGSADQTKI---SIGLSSLHPTKESTIKDQGQMKQQEATQPATALKPKIKHDWYQTETHVILTVLAKSLKQEKVQIEFQSKSLSVTAKLPNGNDYSLELDLAHDIDPKDSRFKVLSTKIEIKMKKCEGIRWSSLETDNE----SQFTKNAKATKERTESTSGATSAVDVHKYPSSKHMYSDWDKLAKQLQEEEKTENMEGDAALNRLFQQIYSDGSDETKRAMNKSFQESGGTVLSTNWKDIKKEKVEVKPPDCMEYKKY 384
            F   ++A +DED   +++  T+ALE   ++  YY +R   +I + N+  A++D   S++ N  NS A  RKG+  +  + +  ALE + +  +L     DI+  + R  +A + L    S+D   +   S G++         IK + Q  Q  +       + KIK+DWYQTE+ V++T++ K++++  V +EF  K LS   KLP+G DY+L+L+L H I P+ S FKVLSTKIEIK+KK E +RW  LE   +     QF  + K                  + YPSS     +WDKL  +++EEEK E +EGDAALNRLFQQIYSDGSDE KRAMNKSF ESGGTVLSTNW D+ K KVE+ PPD ME+KKY
Sbjct:   15 FQSFSDALIDEDPQAALEELTKALEQKPDDAQYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLRKGICEYHEKNYAAALETFTEGQKL-----DIETGFHRVGQAGLQLLT--SSDPPALDSQSAGITGADANFSVWIK-RCQEAQNGSESEVWTHQSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPEAVRWEKLEGQGDVPTPKQFVADVK------------------NLYPSSSPYTRNWDKLVGEIKEEEKNEKLEGDAALNRLFQQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEINPPDDMEWKKY 365
The following BLAST results are available for this feature:
BLAST of TCONS_00068778-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SGT11.867e-8141.91Protein SGT1 homolog OS=Homo sapiens GN=SUGT1 PE=1... [more]
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