TCONS_00069186-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069186-protein
Unique NameTCONS_00069186-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length488

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069186-protein ID=TCONS_00069186-protein|Name=TCONS_00069186-protein|organism=Clytia hemisphaerica|type=polypeptide|length=488bp
MMEVESDDDIPLSLVARKNSIDDDGSSDSSSDSINEAPTPVKSKPVPLTT
APPAQPTIFEYEWPKNRSGFFFVIECELAKFLEVSVLPEVKKRSISEDEW
RHITEQLGHQFESFKPLKAIQVEDAYQLMAEEYPEKFLLYNKFVHHQEIQ
KLVRKQESQRIDVIKGRIPNIMKRSLRETVRYNSQLNRERIEERRAYFDL
QTQIIHLPQKKRKYDPDFKPEKSLYPLALIPGQYQDYFKRYTPSELRKLP
LNSITESFVQLKAIPQAEKDEEDGEKDTEETESQEEPEMMEEESINTIAK
DKDPFCGICKKGPEMNKRGLPEKLIHCSQCENSGHPSCLDMNRHLVKVIQ
GYDWQCMECKTCTQCSAPHDEEAMMFCDNCDRGYHSYCVGLKEIPKGRWI
CEKCGKCSSCLIRKPVPDGETGRWKNEFTKPTDGSEPEFLQIHCHDCSRL
FRKGSFCPVCLKVYRIEEDHINPMVMCDICDRWIHTGK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043125XLOC_043125Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069186TCONS_00069186Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 361..405
e-value: 6.5E-9
score: 45.6
coord: 305..360
e-value: 1.1E-6
score: 38.2
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 267..366
e-value: 1.4E-10
score: 40.4
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 367..409
e-value: 4.1E-13
score: 48.7
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 450..487
e-value: 8.2E-6
score: 25.1
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 362..406
e-value: 1.4E-9
score: 37.6
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 356..407
score: 10.362
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availableCDDcd15529PHD2_PHF10coord: 361..404
e-value: 1.2758E-23
score: 92.3691
NoneNo IPR availableCDDcd15528PHD1_PHF10coord: 306..359
e-value: 3.45803E-23
score: 91.7039
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 352..414
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 290..361

Blast
[Close]
BLAST of TCONS_00069186-protein vs. Swiss-Prot (Human)
Match: PHF10 (PHD finger protein 10 OS=Homo sapiens GN=PHF10 PE=1 SV=3)

HSP 1 Score: 277.33 bits (708), Expect = 1.216e-87
Identity = 169/484 (34.92%), Postives = 251/484 (51.86%), Query Frame = 0 
Query:    3 EVESDDDIPLSLVARKNSIDDDGSSDSSSDSINEAPTPVKSKPVPLTTAPPAQPTIFEYEWPKNRSGFFFVIECELAKFLEVSVL----PEVKKRSISEDEWRHITE-QLGHQFESFKPLKAIQVEDAYQLMAEEYPEKFLLYNKFVHHQEIQKL---------VRKQESQRIDVIKGRIPNIMKRSLRETVRYNSQLNRERIEERRAYFDLQTQIIHLPQKKRKYDPDFKPEKSLYPLALIPGQYQDYFKRYTPSELRKLPLNSITESFVQLKAIP-----------------QAEKDEEDGEKDTEETESQEEPEMMEEESINTIAKDKD-----------------------------PFCGICKKGPEMNKRGLPEKLIHCSQCENSGHPSCLDMNRHLVKVIQGYDWQCMECKTCTQCSAPHDEEAMMFCDNCDRGYHSYCVGLKEIPKGRWICEKCGKCSSCLIRKPVPDGETGRWKN 426
            E  S+D    S   R  S D   S ++SS  +  +  P ++              + EY+WP + +G +++++ +++++L V+      P++++R +S  E  ++ E  +  + +    L A++ ++   LM +EYP K   Y+  +  +E Q++         +++Q +Q+++  K  +P  +K++ ++   +NS LNRER+EERRAYFDLQT +I +PQ K K  P  + + S YP+ALIPGQ+Q+Y+KRY+P ELR LPLN+          +P                 +  K++   +  +      E P   +E+S     K KD                               CGIC KG E NK+G  E LIHCSQCENSGHPSCLDM   LV +I+ Y WQCMECKTC  C  PH EE MMFCD CDRGYH++CVGL  IP GRWIC+ C +        P P     R KN
Sbjct:   33 EDNSNDGTQPSKRRRMGSGDSSRSCETSSQDLGFSYYPAEN--------------LIEYKWPPDETGEYYMLQEQVSEYLGVTSFKRKYPDLERRDLSHKEKLYLRELNVITETQCTLGLTALRSDEVIDLMIKEYPAKHAEYSVILQEKERQRITDHYKEYSQMQQQNTQKVEASK--VPEYIKKAAKKAAEFNSNLNRERMEERRAYFDLQTHVIQVPQGKYKVLPTERTKVSSYPVALIPGQFQEYYKRYSPDELRYLPLNTALYEPPLDPELPALDSDGDSDDGEDGRGDEKRKNKGTSDSSSGNVSEGESPPDSQEDSFQGRQKSKDKAATPRKDGPKRSVLSKSVPGYKPKVIPNAICGICLKGKESNKKGKAESLIHCSQCENSGHPSCLDMTMELVSMIKTYPWQCMECKTCIICGQPHHEEEMMFCDMCDRGYHTFCVGLGAIPSGRWICDCCQRAP------PTPRKVGRRGKN 494
The following BLAST results are available for this feature:
BLAST of TCONS_00069186-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PHF101.216e-8734.92PHD finger protein 10 OS=Homo sapiens GN=PHF10 PE=... [more]
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