TCONS_00069318-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069318-protein
Unique NameTCONS_00069318-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length104

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069318-protein ID=TCONS_00069318-protein|Name=TCONS_00069318-protein|organism=Clytia hemisphaerica|type=polypeptide|length=104bp
MKGMKRKCQVIFTPTKLSTCDIILEQEGIYGDLEEFNLDLIRLDTDVVTM
EMPLYFKQFFLDNDTTWYHSIARALSSIQGTFGTIPKAHLIGLNSMVILF
FKCF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043196XLOC_043196Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069318TCONS_00069318Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001619Sec1-like
Vocabulary: Biological Process
TermDefinition
GO:0006904vesicle docking involved in exocytosis
GO:0016192vesicle-mediated transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006904 vesicle docking involved in exocytosis
biological_process GO:0016192 vesicle-mediated transport
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1910coord: 40..92
e-value: 4.5E-9
score: 35.6
NoneNo IPR availableGENE3D3.40.50.2060coord: 1..39
e-value: 0.0012
score: 18.0
IPR001619Sec1-like proteinPFAMPF00995Sec1coord: 4..89
e-value: 2.2E-7
score: 30.4
IPR001619Sec1-like proteinSUPERFAMILY56815Sec1/munc18-like (SM) proteinscoord: 3..92

Blast
[Close]
BLAST of TCONS_00069318-protein vs. Swiss-Prot (Human)
Match: VP33B (Vacuolar protein sorting-associated protein 33B OS=Homo sapiens GN=VPS33B PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 2.558e-21
Identity = 37/94 (39.36%), Postives = 63/94 (67.02%), Query Frame = 0 
Query:    1 MKGMKRKCQVIFTPTKLSTCDIILEQEGIYGDL--EEFNLDLIRLDTDVVTMEMPLYFKQFFLDNDTTWYHSIARALSSIQGTFGTIPKAHLIG 92
            + G  RK +VIF+P K   C+++LE+EGIYGD+  +E+   L+ LD D+++ME+P +F+ +FL+ D  W +++A+AL  +   +G  P  + IG
Sbjct:  104 LAGRTRKYKVIFSPQKFYACEMVLEEEGIYGDVSCDEWAFSLLPLDVDLLSMELPEFFRDYFLEGDQRWINTVAQALHLLSTLYGPFPNCYGIG 197
The following BLAST results are available for this feature:
BLAST of TCONS_00069318-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VP33B2.558e-2139.36Vacuolar protein sorting-associated protein 33B OS... [more]
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