TCONS_00069357-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00069357-protein
Unique Name	TCONS_00069357-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	589

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00069357-protein ID=TCONS_00069357-protein|Name=TCONS_00069357-protein|organism=Clytia hemisphaerica|type=polypeptide|length=589bp
MTFADINNTCYLVSFFIFGMLETLLCSGITYGWASIVYVFKTEYFYMHLC
EDWYAAQNKSLPTPKPRLSAIDFVFKSNPVNTEPGEYPIVRGGAAYIDDG
KLPGCPAQDARLNLIFTVSLFCLCGIKFPAGIFIDKCGPRIARAVGGTMY
ILACIGLGFVSVGYEDILFGVFAMICMGGSLLVVSVYQVSNIIFRQARSR
IICILHGAFDSSAVMLLIFKMIYDHGIQYRYIMFGYTLICLVLILIGTFI
LIPRLYKLFQWIEEEARLQGYYAIRRDSFAGPDFVVRSLGWENYAQVTYE
ARRKSRTLTYGSTNDSIGSIKEENGLANSYEDHNENVDVWEGENEPLVNQ
NQMSSKSHKRFGKGSVLNSILSPLYLFELIYLIGFQLKLWYFVGSMADFL
GRLTLNDKTLISQYVDIFGYVQFGGILVTPLIGLVFDKDRLTGKDKEIMM
MSAHAQRIKKLSDCIAPFAVTNILCMIFCVTSAIENLHLQVVSFVLYAIV
RGFLYSNHGAYMGAAFPASQFGTLYGLGIFIGGTFGIFQYVLFKITSGPL
HGDPFWVNMFLLALVSIGNIHPLYLWWYCRKQKKKIQCK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_043221	XLOC_043221	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00069357	TCONS_00069357	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR020846	MFS_dom

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 7..270 e-value: 1.1E-10 score: 40.5
None	No IPR available	GENE3D	1.20.1250.20		coord: 365..588 e-value: 3.3E-7 score: 29.3
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 112..251 e-value: 5.48906E-5 score: 43.0713
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 356..582 coord: 110..277

Blast

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BLAST of TCONS_00069357-protein vs. Swiss-Prot (Human)
Match: LAT4 (Large neutral amino acids transporter small subunit 4 OS=Homo sapiens GN=SLC43A2 PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 8.284e-61
Identity = 176/581 (30.29%), Postives = 273/581 (46.99%), Query Frame = 0

Query:   19 GMLETLLCSGITYGWASIVYVFKTEYFYMHLCEDWYAAQNKSLPTPKPRLSAIDFVFKSNPVNTEPGEYPIVRGGAAYIDDGKLPGCPAQDARLNLIFTVSLFCLCGIKFPAGIFIDKCGPRIARAVGGTMYILACIGLGFVSV---GYEDILFGVFAMICMGGSLLVVSVYQVSNIIFRQARSRIICILHGAFDSSAVMLLIFKMIYDHGIQYRYIMFGYTLICLVLILIGTFILIPRLYKLFQWIEEE---ARLQGYYAIRRDSFAGPDFVVRSLGWENYAQVTYEARRKSRTLTYGSTNDSIGSIKEENGLANSYEDHNENVDVWEGENEPLVNQNQMSSKSHKRFGKGSVLNSILSPLYLFELIYLIGFQLKLWYFVGSMADFLGRLTLNDKTLISQYVDIFGYVQFGGILVTPLIGLVFD---------------KDRLTGKDKEIMMMSAHAQRIKKLSDCIAPFAVTNILCMIFCVTSAIENLHLQVVSFVLYAIVRGFLYSNHGAYMGAAFPASQFGTLYGLGIFIGGTFGIFQYVLFKITSGPLHGDPFWVNMFLLALVSIGNIHPLYLWWY 578
             +LE LL S +  GW S++ + K+E FY +LC +     N ++                     EPG   +     ++++ G L  C AQD  LNL FTV  F L  I  P GI +DK GPR  R +G   + ++C+ + + +        ++F   A+   GG  +  +   + N+ F   RS  I ++ G++ SSAV     K+IYD G+ +  ++  +   C  L+ +  F         F W  E         Y    + S+ G D  +   G + Y QVT   RR    L+ GS   S+ S KE+  L   ++     VD+ E + +P                  S ++S+ SP+ L  L+ +   QL+L +++G+M + L  L   D+  +  Y  IFG +Q   +L  P+IG + D               KD   G+ K+        ++I+K+++ +  FA TN+L + F VT  I NL LQ++SF+L+ IVRGF++S  G    A +P++QFG+L GL   I   F + Q  LF    GPL GDP WVN+ LL L  +G   PLYL  Y
Sbjct:   19 AVLENLLFSAVLLGWGSLLIMLKSEGFYSYLCTEPENVTNGTVGG-----------------TAEPGHEEV-----SWMN-GWL-SCQAQDEMLNLAFTVGSFLLSAITLPLGIVMDKYGPRKLRLLGSACFAVSCLLIAYGASKPNALSVLIFIALALNGFGGMCMTFTSLTLPNM-FGDLRSTFIALMIGSYASSAVTFPGIKLIYDAGVSFIVVLVVWA-GCSGLVFLNCF---------FNWPLEPFPGPEDMDYSVKIKFSWLGFDHKIT--GKQFYKQVTTVGRR----LSVGS---SMRSAKEQVALQEGHKLCLSTVDL-EVKCQP------------DAAVAPSFMHSVFSPILLLSLVTMCVTQLRLIFYMGAMNNILKFLVSGDQKTVGLYTSIFGVLQLLCLLTAPVIGYIMDWRLKECEDASEEPEEKDANQGEKKK----KKRDRQIQKITNAMRAFAFTNLLLVGFGVTCLIPNLPLQILSFILHTIVRGFIHSAVGGLYAAVYPSTQFGSLTGLQSLISALFALLQQPLFLAMMGPLQGDPLWVNVGLLLLSLLGFCLPLYLICY 538

The following BLAST results are available for this feature:

BLAST of TCONS_00069357-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00069357-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
LAT4	8.284e-61	30.29	Large neutral amino acids transporter small subuni...	[more]

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TCONS_00069357-protein (polypeptide) - C. hemisphaerica