TCONS_00069368-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00069368-protein
Unique Name	TCONS_00069368-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	680

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00069368-protein ID=TCONS_00069368-protein|Name=TCONS_00069368-protein|organism=Clytia hemisphaerica|type=polypeptide|length=680bp
MANLRSVLKCWIEFNLPSLQKSLDQTATETAQRQDEAEKGKKILIELTKE
WRKNTEDDIRSKCSPVIKAFQKEIDSLNKRSKAAESSFLHLYRNILEIPD
PVPALKKADVIQKQLEKTKDLELENQKLRETLDEYHNEFAEVKNQEVTLN
KMKEKIKEYEEKMEIKLKEMLTEKEKILKQEFEDREQQLLDSKLNVAKKL
GDSEARIKYLTEELDKSRQEIFDLKSKHEDEVMGRVSEINMLEMDLERAN
QNILSAEKYSDSLKTQMTSENNQLNISTGGSNEADVELIKSLEYQLSAKE
RELSQLMEEVHHLQATNSRNKDNYQNEIATLELNLEERNMFIGNLEERLE
KQNDYDETKREISVLKMIEFGSTENQEQHQNEAKPLEKLLMEKNKNLLSE
CTLLKVNNADLTVKYEELQKNTAETYRTVKTQKELITLLEGDLLNIRGLP
SAVFRGEGVGAPSTNTIAQSSETELMSKAIQGLDIDGEEDTILDKQTSDS
LLPIIASQRERFRTRNIELEAQSRHQQQQIVALQNEADTVRKDNVKLYEK
IKFLQSYPTKGSTSVGIEDDSVKRYSSQYEQGIDPFSVFSKKEKQQRYVN
LSAPEKVTLNMGRFILSNKIARTLVFFYTIMLHLLVFIVLYKFAFYETSC
PLNGGGVLQSGLSRRQAKPPMPGFQPGQPS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_043225	XLOC_043225	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00069368	TCONS_00069368	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012955	CASP_C

Vocabulary: **Biological Process**
Term	Definition
GO:0006891	intra-Golgi vesicle-mediated transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0030173	integral component of Golgi membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
cellular_component	GO:0030173	integral component of Golgi membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 67..87
None	No IPR available	COILS	Coil	Coil	coord: 401..421
None	No IPR available	COILS	Coil	Coil	coord: 516..550
None	No IPR available	COILS	Coil	Coil	coord: 289..316
None	No IPR available	COILS	Coil	Coil	coord: 200..227
None	No IPR available	COILS	Coil	Coil	coord: 239..259
None	No IPR available	COILS	Coil	Coil	coord: 111..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 661..680
IPR012955	CASP, C-terminal	PFAM	PF08172	CASP_C	coord: 417..644 e-value: 3.3E-59 score: 200.2

Blast

[Close]

BLAST of TCONS_00069368-protein vs. Swiss-Prot (Human)
Match: CASP (Protein CASP OS=Homo sapiens GN=CUX1 PE=1 SV=2)

HSP 1 Score: 539.265 bits (1388), Expect = 0.000e+0
Identity = 296/660 (44.85%), Postives = 451/660 (68.33%), Query Frame = 0

Query:    2 ANLRSVLKCWIEFNLPSLQKSLDQTATETAQRQDEAEKGKKILIELTKEWRKNTEDDIRSKCSPVIKAFQKEIDSLNKRSKAAESSFLHLYRNILEIPDPVPALKKADVIQKQLEKTKDLELENQKLRETLDEYHNEFAEVKNQEVTLNKMKEKIKEYEEKMEIKLKEMLTEKEKILKQEFEDREQQLLDSKLNVAKKLGDSEARIKYLTEELDKSRQEIFDLKSKHEDEVMGRVSEINMLEMDLERANQNILSAEKYSDSLKTQMTSENNQLNISTGGSNEADVELI------KSLEYQLSAKERELSQLMEEVHHLQATNSRNKDNYQNEIATLELNLEERNMFIGNLEERLEKQNDYDETKREISVLKMIEFGSTENQEQHQNEAKPLEKLLMEKNKNLLSECTLLKVNNADLTVKYEELQKNTAETYRTVKTQKELITLLEGDLLNIRGL--PSAVFRGEGVGAPSTNTIAQS--SETELM---SKAIQGLDIDGEEDTILDKQTSDSLLPIIASQRERFRTRNIELEAQSRHQQQQIVALQNEADTVRKDNVKLYEKIKFLQSYPTKGSTSVGIEDDSVKRYSSQYEQGIDPFSVFSKKEKQQRYVNLSAPEKVTLNMGRFILSNKIARTLVFFYTIMLHLLVFIVLYKFAFYET 648
            AN+ S+ + W  F+L  LQ+ LD TAT  A RQDE+E+ +K LIE ++E++KNT +D+R + +P++K+FQ EID+L+KRSK AE++FL++Y+ ++++PDPVPAL     +Q ++++  D+E ENQKLRETL+EY+ EFAEVKNQEVT+  +KEKI+EYE+ ++ + + +  EKE+ L+ +F ++E++L +++++   KL ++E +++ L   L+K+R E+FDLK+K+++E   +  EI M+  DLERANQ    A++ +++L+ Q++S N+ L +++      DVE         SLE +L+AKERE++QL+E+V  LQA+ ++ ++N  ++I+ LE  L  +N  +  LEE+L+ Q DY+E K+E+++LK +EF  +E     Q+ AKPLE LL+EKN++L SE   L+++N+DL+ +  ELQ    E   T   Q+ELI  LE DL  I+ +  P A    EG        I +     T L    +    G   +G+          DSLL II+SQRERFR RN ELEA++R  Q  + ALQ+E D++R DN+KL+EKIKFLQSYP +GS S    DD+  RYSSQYE+ +DPFS FSK+E+Q++Y++LS  +K TL+MGR +LSNK+ART+ FFYT+ LH LVF+VLYK A+ E+
Sbjct:    3 ANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDLRKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLKTKYDEETTAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQADYEEVKKELNILKSMEFAPSEGA-GTQDAAKPLEVLLLEKNRSLQSENAALRISNSDLSGRCAELQVRITEAVATATEQRELIARLEQDLSIIQSIQRPDA----EGAAEHRLEKIPEPIKEATALFYGPAAPASGALPEGQ---------VDSLLSIISSQRERFRARNQELEAENRLAQHTLQALQSELDSLRADNIKLFEKIKFLQSYPGRGSGS----DDTELRYSSQYEERLDPFSSFSKRERQRKYLSLSPWDKATLSMGRLVLSNKMARTIGFFYTLFLHCLVFLVLYKLAWSES 644

The following BLAST results are available for this feature:

BLAST of TCONS_00069368-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00069368-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CASP	0.000e+0	44.85	Protein CASP OS=Homo sapiens GN=CUX1 PE=1 SV=2	[more]

You are here

TCONS_00069368-protein (polypeptide) - C. hemisphaerica