TCONS_00069689-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069689-protein
Unique NameTCONS_00069689-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length197

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069689-protein ID=TCONS_00069689-protein|Name=TCONS_00069689-protein|organism=Clytia hemisphaerica|type=polypeptide|length=197bp
MSAKVQHRLSLRYPLMSGFQERVTEEQIEEFRDAFMAFDKDGNGFITTKE
LAKILRSLGLNPTEKEICKLVNEVDFDGNGKIDFVEFVNMMLLNGDQLVW
NDKDLLEAFHVFDSDNKGYIMAAELKYVLSQMDDEKIRIEELQDMMQASQ
IDQNRKINFNEFKNLAKPDLKIHSHALAQQQQHNQNKQSLRALRFLT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043394XLOC_043394Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069689TCONS_00069689Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 132..152
NoneNo IPR availableGENE3D1.10.238.10coord: 18..53
e-value: 3.5E-19
score: 67.9
NoneNo IPR availableGENE3D1.10.238.10coord: 153..194
e-value: 0.003
score: 16.8
coord: 80..117
e-value: 8.2E-14
score: 50.7
NoneNo IPR availableGENE3D1.10.238.10coord: 118..152
e-value: 2.7E-11
score: 43.0
NoneNo IPR availableGENE3D1.10.238.10coord: 54..79
e-value: 8.3E-18
score: 63.6
IPR002048EF-hand domainSMARTSM00054efh_1coord: 104..132
e-value: 0.038
score: 23.1
coord: 141..169
e-value: 2.6
score: 14.4
coord: 30..58
e-value: 8.3E-7
score: 38.6
coord: 66..94
e-value: 2.6
score: 14.4
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 29..91
e-value: 4.2E-14
score: 52.7
coord: 103..166
e-value: 1.3E-7
score: 31.9
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 26..61
score: 16.801
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 62..97
score: 12.923
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 100..135
score: 12.198
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 137..172
score: 8.99
IPR002048EF-hand domainCDDcd00051EFhcoord: 30..91
e-value: 6.24708E-19
score: 76.4325
IPR002048EF-hand domainCDDcd00051EFhcoord: 104..167
e-value: 1.1941E-8
score: 47.9277
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 75..87
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 39..51
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 21..167

Blast
[Close]
BLAST of TCONS_00069689-protein vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.666e-42
Identity = 70/142 (49.30%), Postives = 103/142 (72.54%), Query Frame = 0 
Query:   21 ERVTEEQIEEFRDAFMAFDKDGNGFITTKELAKILRSLGLNPTEKEICKLVNEVDFDGNGKIDFVEFVNMMLLNGDQLVWNDKDLLEAFHVFDSDNKGYIMAAELKYVLSQMDDEKIRIEELQDMMQASQIDQNRKINFNEF 162
            +++TEEQI EF++AF  FDKDG+G ITTKEL  ++RSLG NPTE E+  ++NEVD DGNG IDF EF+ MM     +   +++++ EAF VFD D  GYI AAEL++V++ +  EK+  EE+ +M++ + ID + ++N+ EF
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKM-KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYEEF 142
The following BLAST results are available for this feature:
BLAST of TCONS_00069689-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM33.666e-4249.30Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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