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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00070012-protein ID=TCONS_00070012-protein|Name=TCONS_00070012-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1148bp
MASNEDQISILDSWILEKIAHKTCQFYTESCYSCLARCVTIWKNLLGLNI
QTIPRLKEYAVIIDLINQSFEPDDSSSLQKLLGMMNDEFKNSKHSEKIKE
YIKIASSAEKQDNSNIQSYLKKLVKQFLKEQQKPKLDTFMSVLLDEREKQ
RSTQHGDVEEDSEEAIPKSTMKRKRTRLISQPSSEEGGSERNSGNISSQT
SNTKAVNDEDDDDDESQSLSRDEGHRTSYTRILRSRPQKIQGYQNKIRKR
NSRSSPKPTNTLESSNSSDAKETSKEKETGTQKRTLANNTDQQLLEEKTA
PKNGAHKRSLQRNALQERAGTDVIDDRSPKRSLRSVRLINKMDQEESNQK
ATQRSPKIRSSEVNHDEGDESDDEDRISLQQLQQKIASSLKNGQVNPVNQ
KEDHQKSLEDKVDENSCDGSLRGDRQPVTEDVDILSNSLKMTFKCEKSKW
LIQIKKGYIQCPFKGCNWKFFTAYELGYHLDGNCPHGTYQDQIPCPHCDK
SLPWRQLKQHTTNSHRDIKRALTGLFYGKTLKCLNYKCSRTFSPGFDNCV
EYLKHSITCKPLFQCKKCKRGFRSEKHLNFNHTKEQCQSNPKSAGGGRIS
EEIIPTNINHAATKPSAIKGKEKALIQTWKTAIKAGKLKCPIPNCKAKYF
STRAWKEHLLAEAQVEIDFFAKVNQTEIGCPYCSLEMPWKSLAVHFNNNH
SDINGVLSELRSGNDVKCPNYYCPTKAEFIPETGCDYLVHAIKCKPTYYC
PTCCRRFMNSKYFKTHKCMSGNIRGKRPSSEDHNGNYKKKKGFGIVKKTH
AINKKPSVMKHEKRFGSSSTPDKIIQNSTEKSPKIRSSEVNHDEEDKSDD
ENRISLQQLQQQLQQKIASSLKNGQYNPVNQKENHQKVLRSNYDQKSLKD
KSDKNSCDGSLRGDRQPVTEDVDILPNTTQKSSDEMLPISVSQQHATEEL
NPSTTQRSLVDVSSTRTLRSGRLQDAKQFNPKPSQNPPEKLSSVTNDEID
DDEQEILREIEDELNSITTSTFSKMGEHFNEDPRDIEARFNDVTKRMLPY
INASEENDINASEENDINASEENDINASEENDVNASEENDINASEENDVN
ASEENDVNASEENAVNASEENDVNASEENDVNASEENDVNASEENDVN Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR013087 | Znf_C2H2_type |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 1100..1120 |
| None | No IPR available | GENE3D | 2.160.10.10 | | coord: 332..617
e-value: 0.043
score: 12.8
coord: 619..897
e-value: 3.0E-5
score: 23.2 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 773..851 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 944..963 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 148..375 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 388..425 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 970..998 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 872..937 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1051..1148 |
| IPR013087 | Zinc finger C2H2-type | SMART | SM00355 | c2h2final6 | coord: 459..486
e-value: 27.0
score: 9.4
coord: 563..582
e-value: 140.0
score: 3.0
coord: 678..700
e-value: 60.0
score: 6.4
coord: 638..660
e-value: 120.0
score: 3.8
coord: 493..515
e-value: 2.7
score: 17.0 |
Blast
The following BLAST results are available for this feature:
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