TCONS_00070078-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070078-protein
Unique NameTCONS_00070078-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length491

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070078-protein ID=TCONS_00070078-protein|Name=TCONS_00070078-protein|organism=Clytia hemisphaerica|type=polypeptide|length=491bp
MSSNKQDILQGERCTTLGACAVDNTKCSICLAQIDRGSKSNKCSHCIKKM
NSIPTGFQFETDGEEKKEFECPICLGIIRDATELPCHHLMCLACLEHYEN
EEKEKVKGNGEDEKTAVYLCSICQKPYQPKDKYQVKSIDRIIQTSIRVKC
HQKQCTWVGCIMDYQQHDKICNCVLEPCPYFELGCDVMIERGQIQTHSRS
NSIIHETLLLKSVKMFSQERKQYQQQINDQNKKIESLEATVTTLKKHVEK
IEKDTAQNILTTKSEAAKAQKMRENIVNIEKDFDQRKAEVQNLKVHAEQL
SELHLTLSLPDIRNQRSVSKFLHKKDYDTMKEVKSWNAFVKIANRNKNCS
YLNTLKDAINNYSETVFSKKWHTRLSQKTRSQTEGCMVYGYLKLRTYIQI
EKISVKKCNDRKEFQEATRDEKWCRHSAFTASFVDFPNEALHVMIQFDFK
TVSLFHWEDEEKNRTIPLNGVPVILGDRKFSLHAGVLLRFN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043634XLOC_043634Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070078TCONS_00070078Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR018957Znf_C3HC4_RING-type
IPR017907Znf_RING_CS
IPR008974TRAF-like
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 213..254
NoneNo IPR availableCOILSCoilCoilcoord: 269..289
NoneNo IPR availableGENE3D1.20.1170.10coord: 194..383
e-value: 7.6E-6
score: 24.5
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 65..143
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 71..123
e-value: 2.1E-5
score: 34.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 71..124
score: 9.627
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 70..98
e-value: 0.00758796
score: 33.5732
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 140..193
e-value: 6.7E-9
score: 35.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 61..136
e-value: 3.7E-11
score: 41.8
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 71..102
e-value: 8.2E-6
score: 25.5
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 86..95
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 145..200

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070078-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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