TCONS_00070164-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070164-protein
Unique NameTCONS_00070164-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1909

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070164-protein ID=TCONS_00070164-protein|Name=TCONS_00070164-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1909bp
MDLFVVALSEISLEGLEGVSINKLWELIDKRQPPVDCAIDQWTKPSIWED
IVLSEHIEFYAVDFNTEKRPGIPQNKKEERVAKKMPPNWINDYRTGIMGY
CQSYFYRDCVTDVIRNEKDRSVKMTYIEAVEKWGDELHLVASQGCRQRIL
FGNNYPPIIEEVTAPRFIILEIIGRSRWEGFMQADFQRLFGMDSRTSFHH
VKVLIQLHLMTKQSVLVKNNKNCPVGGKVEPPRCSKVLHLRQFSSVFTNQ
IQRTAQRICSILEEAPDQTIERNQLKEMCSVQDVTRFKKIRQWLFNLGYI
QYIVNGEIWSHDNTNPIQLTHFRASRPCYVNLVKPFDAQDVDDDKDEFLD
YIENCDDIEPQLVMEETLHSQAYQILLAVREKGITMKKLAEILCIPHYMA
RSVIRFFDTNKIGRLISVDHLKQKVQKIVAIQFLHESDTVQEIQSNKIKI
EEHKKSDVKSELAIKQEGNEDAKLSTIKEMNLRLADNLSLTRVHEKSKVS
LRPLARKNFILDALQKQPVYEGYNELYKLLVVSEDATKSTTGTCCRKTFR
KIIRSLAQEKQLNEIMITIDETCIPPLQSLFICASQISEESDELKIIVDQ
VKVRHEKHIQRREMRYAATKKEPGSASKRKRSPSSSANNSAPEKSIKLEG
SHGDSTTVDQSSEVAETETSLEKIENVDMESDTDDEEFAKSKMTGRYLSS
FSKYFTYGRFQRLHVLHMFLWQLVYGTPEDLTCFEYCPEYMDLIKSQRMW
LEHAHGLPTYSQGKGWFNVGDIISLMPLELTCRILGIKCWSNTAIKFLED
PKRRFTRMCDLPTRLKFKLLASTANKQHLDNCVDLLVLLAQMGLIAVPHN
FYPKVRSEIMLYLRREAVITDTRYSEKGYCHIRLPHNSEEFPKTEYKFKV
VKDLKSFWEDLQFICLNTPLGLSRITRSREGIPEEKELNKEQLSMGKAGI
NQTSSSKGLGRNYRSFTILRDFQSYYENKDFNNMEPNVFGNGLGAGGLDS
IFFAHLVKNWRTGDTKQPKQKPSKKPRTTGAAFTGKEKTKETWSTASDPQ
NDVTKKIIIPNSIVKKKKGGKGLKRTQLASKIVMTKKMKMDRKKKFDQLI
AKRFDTIREKIKQREVKRKTLRKSKRVQQAMNHDETDREALRLMKGLRVS
FTEREDAYILLADIVRNIMNLSAKGQPLEKEHPKILWRAIRDILHKDIPE
SKDKTWNAINRRARYIKKYPHSLIVYKTCMAELEQNKDFMGSIKCTKDNW
KEKLNHFFNATREIYSRHFNQPVTLDGFPSTFEELFRDYEVDYADKEKED
ESSKLQPRTEKSIRTNIIRDLVHNAMIAQRSSAYKPSLAFKLFDVYTEED
VRKAFEHFKKNRLVSRLRCDLPRSRSLPVTTMTYTLSSQTYDRIFEPPMP
LKMFSAARCFYFQLRDGKKHTGKCAEKDLSRLPVINQHGFLHLDYSELQA
GHVAYLLSAMMSRKIVLDFTLNDEMIVADEEHMKKLQKGSLNFQRVAFQQ
RVLKGRNMKRLSQSSLKNSTEEGETGLKSNTDEYDTAEESDHAPSLMSNS
SRPVGASEDVTGKMTTVRESGVTPSQVSESESTGGAKARKSDNTPSDCVI
DDGQEPCCSKSLPKNDTGRQDDDVMLKRVDSLLRKHDVISIEDKEGKQSE
NEISSDSKNSNSTSTATKRDVKKPATDKRRVTFSNSFSEHGTVRGTVEEY
LGTSQQFLNGHFYKLSNNDPCTSYVSEDLPDDLQSARAFTYSTLDQIKSK
PNPSIDYFKETKLFASRTSLAMHRSLNFERLDPMNAMNTHDALVINPMGL
NINLVTSPFRAYFSKTKVKHSEKETELWKRIKDSNAINDVIINRLTPGEY
SEILKEELSLEANLVEEHLKLLEEVKKHGNIGMDKQSFKTYCRTSLPLFH
EDFKENVQH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043695XLOC_043695Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070164TCONS_00070164Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007309TFIIIC_Bblock-bd
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1855..1875
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 609..670
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1013..1048
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1640..1684
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1509..1622
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 936..957
IPR007309B-block binding subunit of TFIIICPFAMPF04182B-block_TFIIICcoord: 164..221
e-value: 4.1E-11
score: 42.8

Blast
BLAST of TCONS_00070164-protein vs. Swiss-Prot (Human)
Match: TF3C1 (General transcription factor 3C polypeptide 1 OS=Homo sapiens GN=GTF3C1 PE=1 SV=4)

HSP 1 Score: 243.432 bits (620), Expect = 2.326e-64
Identity = 260/1034 (25.15%), Postives = 440/1034 (42.55%), Query Frame = 0
Query:  494 HEKSKVSLRPLARKNFILDALQKQPVYEGYNELYKLLVVSEDATKSTTGTCCRKTFRKIIRSLAQEKQLNEIMITIDETCIPPLQSLFICASQISEESDEL-KIIVDQVKVRHEKHIQRREMRYAATKKEPGSASKRKRSPSSSANNSAPEKSIKLEGSHGDSTTVDQSSEVAETETSLEKIENVDMESDTDDEEFAKSKMTGRYLSSFSKYFTYGRFQRLHVLHMFLWQLVYGTPEDLT-----------------------------CFEYCPE-----------------------YMDLIKSQRMWLEHAHGLPTYSQ-GKGWFNVGDIISLMPLELTCRILGIKCWSNTAIKFLEDPKRRFTRMCDLPTRLKFKLLASTANKQHLDNCVDLLVLLAQMGLIAVPHNFYPKVRSEIMLYLRREAVITDTRYSEKGYCHIRLPHNSEEFPKTEYKFKVVKDLKSFWEDLQFICLNTPLGLSRITRSR------EGIPEEKELNKEQLS-MGKAGINQTSSSKGLGRNYRSFTILRDFQSYYENKDFNNMEPNVFGNGLGAGGLDSIFFAHLVKNW-----------------RTGDTKQPKQKPSKKPRTTGAA------FTGKEKTKETWSTASDPQNDVTKKIIIPNSIVKKKKGGKGLKRTQLASKIVMTKKMKMDRKKKFDQLIAKRFDTIREKIKQREVKRKTLRKSKRVQQAMNHDETDREALRLMKGLRVSFTEREDAYILLADIVRNIMNLSAKGQPLEKEHPKILWRAIRDILHKDIPESKDKTWNAINRRARYIKKYPHSLIVYKTCMAELEQNKDFMGSIKCTKDNWKE------KLNHFFNATREIYS---RHFNQPVTLDGFPSTFEELFRDYEVDYADKEKEDESSKLQPRTEKSIRTNIIRDLVHNAMIAQRSS--AYKPSLAFKLFDVYTEEDVRKAFEHFKKNRLVSRLRCD----LPRSRSLPVTTMTYTLSSQTYDRIFEPPMPLKMFSAARCFYFQLRDGKKHTGKCAEKD 1428
             +K   + R L R+N I++A+    + E    + K+ ++ ++  +  +  CC+K+  +++R+L++E  L     T+ +  I     L +  S   +++D L +  ++QV+ R                    +A++ K S        A E S   EG  G   +   +S  +E+   ++K +N    +   +         GR L    K        RL V+HMFLW L+YG P   T                              +E C E                       Y+D       W+ +   +P +   G GW  V DI+  +PL +  +I+ +    +   +FL DP ++ T +  LP  ++ +LL     ++++ + V+ L  L  MGL+        + + ++ ++L++ AVI DT   +    H  L  +S  F +  Y    ++D++++W DLQ +CLNTPLG+ R  R R      +G  EE  L KEQ S M K  +             R   +L       E  D    E  + G+GLGA GLDS F+ HL +NW                   G T + +   SK+P    A         G+ +         + Q +V ++  +  +  ++ +GGK  KR          K++K D  KK  +     F                  KSKR++    HDE D+ AL+ M  LRV+++ +ED  ++L  I  N++N   KG       P + W+ +RDILH    ES DKT +++ RRARYI K P + + YK C+AE+ Q+K  +G     + ++ +      +   F    +E +S   R+ N  +     P T +ELF  Y V     EK+    + +  +   I   ++++L+ + +    S   +Y+    F+L+  Y +  + KAF   +K  LV+R R +      ++R+LP   M+Y L SQTY RIF    P  + + +    FQ  D  +  GK  + D
Sbjct:  605 QDKPHETYRLLKRRNLIIEAVTNLRLIESLFTIQKM-IMDQEKQEGVSTKCCKKSIVRLVRNLSEEGLLRLYRTTVIQDGIKKKVDLVVHPSM--DQNDPLVRSAIEQVRFRISNS---------------STANRVKTSQPPVPQGEAEEDSQGKEGPSGSGDSQLSASSRSES-GRMKKSDNKMGITPLRNYHPIVVPGLGRSLGFLPK------MPRLRVVHMFLWYLIYGHPASNTVEKPSFISERRTIKQESGRAGVRPSSSGSAWEACSEAPSKGSQDGVTWEAEVELATETVYVD----DASWMRYIPPIPVHRDFGFGWALVSDILLCLPLSIFIQIVQVSYKVDNLEEFLNDPLKKHTLIRFLPRPIRQQLLY---KRRYIFSVVENLQRLCYMGLLQFGPTEKFQDKDQVFIFLKKNAVIVDTTICDP---HYNLARSSRPFERRLYVLNSMQDVENYWFDLQCVCLNTPLGVVRCPRVRKNSSTDQGSDEEGSLQKEQESAMDKHNLE------------RKCAMLEYTTGSREVVD----EGLIPGDGLGAAGLDSSFYGHLKRNWIWTSYIINQAKKENTAAENGLTVRLQTFLSKRPMPLSARGNSRLNIWGEARVGSELCAGWEEQFEVDREPSLDRN--RRVRGGKSQKR----------KRLKKDPGKKIKRKKKGEFPG---------------EKSKRLRY---HDEADQSALQRMTRLRVTWSMQEDGLLVLCRIASNVLNTKVKG-------PFVTWQVVRDILHATFEESLDKTSHSVGRRARYIVKNPQAYLNYKVCLAEVYQDKALVGDFMNRRGDYDDPKVCANEFKEFVEKLKEKFSSALRNSNLEI-----PDTLQELFARYRVLAIGDEKDQTRKEDELNSVDDIHFLVLQNLIQSTLALSDSQMKSYQSFQTFRLYREYKDHVLVKAFMECQKRSLVNRRRVNHTLGPKKNRALPFVPMSYQL-SQTYYRIFTWRFPSTICTES----FQFLDRMRAAGKLDQPD 1540          

HSP 2 Score: 118.242 bits (295), Expect = 2.647e-26
Identity = 119/468 (25.43%), Postives = 213/468 (45.51%), Query Frame = 0
Query:    1 MDLFVVALSEISLEGLEGVSINKLWELIDKRQPPVDCAIDQWTKPSIWEDIVLSEHIEFYA-----VDFNTEKR-------PGIPQNKKEERVAKKM-PPNWINDYRTGIMGYCQSYFYRDCVTDVIRNEKDRSVKMTYIEAVEKWGDELHLVASQGCRQRILFGNNYPPIIEEVTAPRF--IILEIIGRSRWEGFMQADFQ-RLFGMDSRTSFHHVKVLIQLHLMTKQSVLVKNNKNCPVGGKVEPPRCSKVLHLRQFSSVFTNQIQRTAQRICSILEEAPDQTIERNQLKEMCSVQDVTRFKKIRQWLFNLGYIQYIVNGEIWSHDNTNPIQLTHFRASRPCYVNLVKPFDAQDVDDDKDEFLDYIENCDDIEP-QLVMEETLHSQAYQILLAVREKGITMKKLAEILCIPHYMARSVIRFFDTNKIGRLISVDHLKQKVQKIVAIQFLHESDTVQEIQSNKIKIE 451
            MD     L E++LEGL+G+ +  LW  ++ R PP    ++  T+  +W  +     I FY       D   + R        GI +++++    + + P + I + + GI G C+ +  R  +T+ IR  K    + T +EA ++WG +L +VASQ  R R L G    P   ++  P F   ILE +GRSRW+G +Q D     F +D+    +H K+L +  L+T QS +++     P G +    + S +L L +F     ++     +++  +L    +      +L+E   + + T FK++ Q++ N G  + +       H    P +           + L+K F   D DDD+DE +        + P  +V E  + +Q Y ++     KGI+  ++   + +    AR + R     K+ +    D  +Q+  K ++  F  ESD  ++ Q  K + E
Sbjct:    1 MDALESLLDEVALEGLDGLCLPALWSRLETRVPPFPLPLEPCTQEFLWRALATHPGISFYEEPRERPDLQLQDRYEEIDLETGILESRRDPVALEDVYPIHMILENKDGIQGSCRYFKERKNITNDIRT-KSLQPRCTMVEAFDRWGKKLIIVASQAMRYRALIGQEGDP---DLKLPDFSYCILERLGRSRWQGELQRDLHTTAFKVDAGKLHYHRKILNKNGLITMQSHVIR----LPTGAQ----QHSILLLLNRFHVDRRSKYDILMEKLSVMLSTRTNHIETLGKLREELGLCERT-FKRLYQYMLNAGLAKVVSLRLQEIHPECGPCKTKKGTDVMVRCLKLLKEFKRNDHDDDEDEEV----ISKTVPPVDIVFERDMLTQTYDLIERRGTKGISQAEIRVAMNVGKLEARMLCRLLQRFKVVKGFMEDEGRQRTTKYISCVFAEESDLSRQYQREKARSE 451          
The following BLAST results are available for this feature:
BLAST of TCONS_00070164-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TF3C12.326e-6425.15General transcription factor 3C polypeptide 1 OS=H... [more]
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