Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00070164-protein ID=TCONS_00070164-protein|Name=TCONS_00070164-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1909bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00070164-protein vs. Swiss-Prot (Human)
Match: TF3C1 (General transcription factor 3C polypeptide 1 OS=Homo sapiens GN=GTF3C1 PE=1 SV=4) HSP 1 Score: 243.432 bits (620), Expect = 2.326e-64 Identity = 260/1034 (25.15%), Postives = 440/1034 (42.55%), Query Frame = 0 Query: 494 HEKSKVSLRPLARKNFILDALQKQPVYEGYNELYKLLVVSEDATKSTTGTCCRKTFRKIIRSLAQEKQLNEIMITIDETCIPPLQSLFICASQISEESDEL-KIIVDQVKVRHEKHIQRREMRYAATKKEPGSASKRKRSPSSSANNSAPEKSIKLEGSHGDSTTVDQSSEVAETETSLEKIENVDMESDTDDEEFAKSKMTGRYLSSFSKYFTYGRFQRLHVLHMFLWQLVYGTPEDLT-----------------------------CFEYCPE-----------------------YMDLIKSQRMWLEHAHGLPTYSQ-GKGWFNVGDIISLMPLELTCRILGIKCWSNTAIKFLEDPKRRFTRMCDLPTRLKFKLLASTANKQHLDNCVDLLVLLAQMGLIAVPHNFYPKVRSEIMLYLRREAVITDTRYSEKGYCHIRLPHNSEEFPKTEYKFKVVKDLKSFWEDLQFICLNTPLGLSRITRSR------EGIPEEKELNKEQLS-MGKAGINQTSSSKGLGRNYRSFTILRDFQSYYENKDFNNMEPNVFGNGLGAGGLDSIFFAHLVKNW-----------------RTGDTKQPKQKPSKKPRTTGAA------FTGKEKTKETWSTASDPQNDVTKKIIIPNSIVKKKKGGKGLKRTQLASKIVMTKKMKMDRKKKFDQLIAKRFDTIREKIKQREVKRKTLRKSKRVQQAMNHDETDREALRLMKGLRVSFTEREDAYILLADIVRNIMNLSAKGQPLEKEHPKILWRAIRDILHKDIPESKDKTWNAINRRARYIKKYPHSLIVYKTCMAELEQNKDFMGSIKCTKDNWKE------KLNHFFNATREIYS---RHFNQPVTLDGFPSTFEELFRDYEVDYADKEKEDESSKLQPRTEKSIRTNIIRDLVHNAMIAQRSS--AYKPSLAFKLFDVYTEEDVRKAFEHFKKNRLVSRLRCD----LPRSRSLPVTTMTYTLSSQTYDRIFEPPMPLKMFSAARCFYFQLRDGKKHTGKCAEKD 1428 +K + R L R+N I++A+ + E + K+ ++ ++ + + CC+K+ +++R+L++E L T+ + I L + S +++D L + ++QV+ R +A++ K S A E S EG G + +S +E+ ++K +N + + GR L K RL V+HMFLW L+YG P T +E C E Y+D W+ + +P + G GW V DI+ +PL + +I+ + + +FL DP ++ T + LP ++ +LL ++++ + V+ L L MGL+ + + ++ ++L++ AVI DT + H L +S F + Y ++D++++W DLQ +CLNTPLG+ R R R +G EE L KEQ S M K + R +L E D E + G+GLGA GLDS F+ HL +NW G T + + SK+P A G+ + + Q +V ++ + + ++ +GGK KR K++K D KK + F KSKR++ HDE D+ AL+ M LRV+++ +ED ++L I N++N KG P + W+ +RDILH ES DKT +++ RRARYI K P + + YK C+AE+ Q+K +G + ++ + + F +E +S R+ N + P T +ELF Y V EK+ + + + I ++++L+ + + S +Y+ F+L+ Y + + KAF +K LV+R R + ++R+LP M+Y L SQTY RIF P + + + FQ D + GK + D Sbjct: 605 QDKPHETYRLLKRRNLIIEAVTNLRLIESLFTIQKM-IMDQEKQEGVSTKCCKKSIVRLVRNLSEEGLLRLYRTTVIQDGIKKKVDLVVHPSM--DQNDPLVRSAIEQVRFRISNS---------------STANRVKTSQPPVPQGEAEEDSQGKEGPSGSGDSQLSASSRSES-GRMKKSDNKMGITPLRNYHPIVVPGLGRSLGFLPK------MPRLRVVHMFLWYLIYGHPASNTVEKPSFISERRTIKQESGRAGVRPSSSGSAWEACSEAPSKGSQDGVTWEAEVELATETVYVD----DASWMRYIPPIPVHRDFGFGWALVSDILLCLPLSIFIQIVQVSYKVDNLEEFLNDPLKKHTLIRFLPRPIRQQLLY---KRRYIFSVVENLQRLCYMGLLQFGPTEKFQDKDQVFIFLKKNAVIVDTTICDP---HYNLARSSRPFERRLYVLNSMQDVENYWFDLQCVCLNTPLGVVRCPRVRKNSSTDQGSDEEGSLQKEQESAMDKHNLE------------RKCAMLEYTTGSREVVD----EGLIPGDGLGAAGLDSSFYGHLKRNWIWTSYIINQAKKENTAAENGLTVRLQTFLSKRPMPLSARGNSRLNIWGEARVGSELCAGWEEQFEVDREPSLDRN--RRVRGGKSQKR----------KRLKKDPGKKIKRKKKGEFPG---------------EKSKRLRY---HDEADQSALQRMTRLRVTWSMQEDGLLVLCRIASNVLNTKVKG-------PFVTWQVVRDILHATFEESLDKTSHSVGRRARYIVKNPQAYLNYKVCLAEVYQDKALVGDFMNRRGDYDDPKVCANEFKEFVEKLKEKFSSALRNSNLEI-----PDTLQELFARYRVLAIGDEKDQTRKEDELNSVDDIHFLVLQNLIQSTLALSDSQMKSYQSFQTFRLYREYKDHVLVKAFMECQKRSLVNRRRVNHTLGPKKNRALPFVPMSYQL-SQTYYRIFTWRFPSTICTES----FQFLDRMRAAGKLDQPD 1540 HSP 2 Score: 118.242 bits (295), Expect = 2.647e-26 Identity = 119/468 (25.43%), Postives = 213/468 (45.51%), Query Frame = 0 Query: 1 MDLFVVALSEISLEGLEGVSINKLWELIDKRQPPVDCAIDQWTKPSIWEDIVLSEHIEFYA-----VDFNTEKR-------PGIPQNKKEERVAKKM-PPNWINDYRTGIMGYCQSYFYRDCVTDVIRNEKDRSVKMTYIEAVEKWGDELHLVASQGCRQRILFGNNYPPIIEEVTAPRF--IILEIIGRSRWEGFMQADFQ-RLFGMDSRTSFHHVKVLIQLHLMTKQSVLVKNNKNCPVGGKVEPPRCSKVLHLRQFSSVFTNQIQRTAQRICSILEEAPDQTIERNQLKEMCSVQDVTRFKKIRQWLFNLGYIQYIVNGEIWSHDNTNPIQLTHFRASRPCYVNLVKPFDAQDVDDDKDEFLDYIENCDDIEP-QLVMEETLHSQAYQILLAVREKGITMKKLAEILCIPHYMARSVIRFFDTNKIGRLISVDHLKQKVQKIVAIQFLHESDTVQEIQSNKIKIE 451 MD L E++LEGL+G+ + LW ++ R PP ++ T+ +W + I FY D + R GI +++++ + + P + I + + GI G C+ + R +T+ IR K + T +EA ++WG +L +VASQ R R L G P ++ P F ILE +GRSRW+G +Q D F +D+ +H K+L + L+T QS +++ P G + + S +L L +F ++ +++ +L + +L+E + + T FK++ Q++ N G + + H P + + L+K F D DDD+DE + + P +V E + +Q Y ++ KGI+ ++ + + AR + R K+ + D +Q+ K ++ F ESD ++ Q K + E Sbjct: 1 MDALESLLDEVALEGLDGLCLPALWSRLETRVPPFPLPLEPCTQEFLWRALATHPGISFYEEPRERPDLQLQDRYEEIDLETGILESRRDPVALEDVYPIHMILENKDGIQGSCRYFKERKNITNDIRT-KSLQPRCTMVEAFDRWGKKLIIVASQAMRYRALIGQEGDP---DLKLPDFSYCILERLGRSRWQGELQRDLHTTAFKVDAGKLHYHRKILNKNGLITMQSHVIR----LPTGAQ----QHSILLLLNRFHVDRRSKYDILMEKLSVMLSTRTNHIETLGKLREELGLCERT-FKRLYQYMLNAGLAKVVSLRLQEIHPECGPCKTKKGTDVMVRCLKLLKEFKRNDHDDDEDEEV----ISKTVPPVDIVFERDMLTQTYDLIERRGTKGISQAEIRVAMNVGKLEARMLCRLLQRFKVVKGFMEDEGRQRTTKYISCVFAEESDLSRQYQREKARSE 451 The following BLAST results are available for this feature:
BLAST of TCONS_00070164-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
|