TCONS_00070176-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070176-protein
Unique NameTCONS_00070176-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length562

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070176-protein ID=TCONS_00070176-protein|Name=TCONS_00070176-protein|organism=Clytia hemisphaerica|type=polypeptide|length=562bp
MFHLLXTAPPTTTTTAPPTTTTTTEEYVPPPLSKEKQSVECHNSRRMLHQ
DTPDLGWDTELEELAQAWADVIAARGTMEHDPKNDADQTGENIYWASGGT
RTVEDACKAWYDEIDDYDFKTHGKKASSPSNKMIGHFTQMVWKSTTKIGV
GIAYKGSEIYIVAKYRARGNFIGRYAENVMPKTSENGQVLDKDPPPKTES
QSPAGETTSFEVRPPTFVFTIRFTFRYVFVMIRIFPSGSTTGARKPNAYS
LSDCARGVDSIRIIFKFRRPSDYQSPCRCGRRSTSSRKRRSIDYENNDDD
DEDDNDVEENDSFSIPNQYLLDQQGFPQFALPETSEDAVHFRHRRNTDDT
IDPDSIVPSNPELPPGSTHAIFYMGQINDGASIVSDWYDPVTTQVSADET
YCTAQKSCACDAIATGPLNATIDINNATYAGLNDSAVNTSILAIGNYDQQ
TIINTCKEAKCDSTALSTTISGIESSINQTQSDIQTINDAKKNLRLAIDC
RVNSDNRDEIFDHYQSLFTREAYISNVMEDLKIKKEILEKEKKRCENRSW
LRQVLENVWHKG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043703XLOC_043703Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070176TCONS_00070176Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002413V5_allergen
IPR001283Allrgn_V5/Tpx1
IPR014044CAP_domain
IPR018244Allrgn_V5/Tpx1_CS
IPR034113SCP_GAPR1-like
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005576 extracellular region
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 528..548
IPR002413Ves allergenPRINTSPR00838V5ALLERGENcoord: 55..73
score: 43.09
coord: 133..152
score: 54.69
coord: 104..119
score: 33.2
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPRINTSPR00837V5TPXLIKEcoord: 160..173
score: 36.77
coord: 106..119
score: 36.54
coord: 134..150
score: 51.33
coord: 55..73
score: 33.8
IPR014044CAP domainSMARTSM00198SCP_3coord: 33..173
e-value: 2.8E-34
score: 129.9
IPR014044CAP domainGENE3D3.40.33.10coord: 5..176
e-value: 3.3E-37
score: 127.8
IPR014044CAP domainPFAMPF00188CAPcoord: 40..162
e-value: 3.0E-19
score: 70.0
IPR014044CAP domainSUPERFAMILY55797PR-1-likecoord: 35..180
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 135..145
IPR034113Golgi-associated plant pathogenesis-related protein 1, SCP domainCDDcd05382SCP_GAPR-1_likecoord: 35..171
e-value: 8.49707E-48
score: 162.765

Blast
[Close]
BLAST of TCONS_00070176-protein vs. Swiss-Prot (Human)
Match: GAPR1 (Golgi-associated plant pathogenesis-related protein 1 OS=Homo sapiens GN=GLIPR2 PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 4.599e-19
Identity = 53/149 (35.57%), Postives = 82/149 (55.03%), Query Frame = 0 
Query:   37 QSVECHNSRRMLHQDTPDLGWDTELEELAQAWADVIAARGTMEHDPKNDADQTGENIYWASGGTRTVEDACKAWYDEIDDYDFKTHGKKASSPSNKMIGHFTQMVWKSTTKIGVG--IAYKGSEIYIVAKYRARGNFI--GRYAENVMP 181
            + ++ HN  R  H   P L     L   AQ +++ +A+   ++H P++   Q GEN+ WAS   +T ++    WY EI +Y+F+  G  + +      GHFT MVWK+T K+GVG   A  GS  ++VA+Y   GN +  G + ENV+P
Sbjct:   12 EVLKAHNEYRQKH-GVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWAS-YDQTGKEVADRWYSEIKNYNFQQPGFTSGT------GHFTAMVWKNTKKMGVGKASASDGSS-FVVARYFPAGNVVNEGFFEENVLP 151
The following BLAST results are available for this feature:
BLAST of TCONS_00070176-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GAPR14.599e-1935.57Golgi-associated plant pathogenesis-related protei... [more]
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