TCONS_00070201-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070201-protein
Unique NameTCONS_00070201-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length304

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070201-protein ID=TCONS_00070201-protein|Name=TCONS_00070201-protein|organism=Clytia hemisphaerica|type=polypeptide|length=304bp
MMKINYFEISRIPTVDAKKVLATIEDDERNPNRKRRRLDNLNVEERILRR
KLKNRVAAQSARDRKKAHMDQLEITLMRVEKENKFLKKSNEELRSQVHQL
MENNAQLRSKLGLTPPASPSQDYTCVIVPKQKENIITPSVCDHDHIVIKK
EEMSPEHALLFGLSLLWNILMTTLVLMITACKMSPRLNYFSILLVITNQS
RWKNPKSVRPQIPPDIQLSKTSQLAIVQQLEDKTITTTKSNVKNSMLMSF
CQMRLMTLLARQALTLSQYHHLIQQSLRSIVVSRCTTPRLKVAWWANQPM
MDTG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043724XLOC_043724Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070201TCONS_00070201Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 62..110
NoneNo IPR availableGENE3D1.20.5.170coord: 61..112
e-value: 9.9E-13
score: 47.7
NoneNo IPR availableGENE3D1.10.880.10coord: 17..60
e-value: 7.8E-4
score: 19.4
NoneNo IPR availableCDDcd14691bZIP_XBP1coord: 44..101
e-value: 3.09309E-19
score: 78.4039
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 46..102
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 42..106
e-value: 1.9E-12
score: 57.4
IPR004827Basic-leucine zipper domainPFAMPF07716bZIP_2coord: 44..94
e-value: 2.2E-10
score: 40.4
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 44..107
score: 11.162

Blast
[Close]
BLAST of TCONS_00070201-protein vs. Swiss-Prot (Human)
Match: XBP1 (X-box-binding protein 1 OS=Homo sapiens GN=XBP1 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 4.740e-19
Identity = 44/81 (54.32%), Postives = 61/81 (75.31%), Query Frame = 0 
Query:   33 RKRRRLDNLNVEERILRRKLKNRVAAQSARDRKKAHMDQLEITLMRVEKENKFLKKSNEELRSQVHQLMENNAQLRSKLGL 113
            RKR+RL +L+ EE+ LRRKLKNRVAAQ+ARDRKKA M +LE  ++ +E+EN+ L   N+ LR + H L+  N +LR +LG+
Sbjct:   59 RKRQRLTHLSPEEKALRRKLKNRVAAQTARDRKKARMSELEQQVVDLEEENQKLLLENQLLREKTHGLVVENQELRQRLGM 139
The following BLAST results are available for this feature:
BLAST of TCONS_00070201-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
XBP14.740e-1954.32X-box-binding protein 1 OS=Homo sapiens GN=XBP1 PE... [more]
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