|
|
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00070245-protein ID=TCONS_00070245-protein|Name=TCONS_00070245-protein|organism=Clytia hemisphaerica|type=polypeptide|length=337bp
MVSRRSSSTTSSENMMIGNNSNNNTQTSMEDDKKFQMGADDEEMKRARRR
MKNKISAQESRRRKKEYVDALELKMKQRDQEKRLLTEKVTELEDRVRQLV
DQLFHAKQNNRENTSSTMTDTEPFVRRRTTDAGTQTGICLECYLQTPSKV
LLTERQIKHETEEEFPSNELTNEKELDPTDCLNHQTSTQTSPYKKTFIDG
FHPENERFHPYRINREHYREISENRDRFREIADFQENREHVRYSSSLSYQ
PSESHRRSSVSYPKSPERYSSPHMARYSPTTNRSASPSHVSDRAPTNPNL
DRDLRQNSMVLPPQATFRRISNASPPSAEKMIPYSKY Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR004827 | bZIP |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003700 | transcription factor activity, sequence-specific DNA binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006355 |
regulation of transcription, DNA-templated |
| molecular_function |
GO:0003700 |
transcription factor activity, sequence-specific DNA binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 68..109 |
| None | No IPR available | GENE3D | 1.10.880.10 | | coord: 4..59
e-value: 3.4E-6
score: 27.0 |
| None | No IPR available | GENE3D | 1.20.5.170 | | coord: 60..106
e-value: 4.7E-11
score: 42.4 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 160..195 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..61 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 241..337 |
| None | No IPR available | SUPERFAMILY | 57959 | Leucine zipper domain | coord: 44..103 |
| IPR004827 | Basic-leucine zipper domain | SMART | SM00338 | brlzneu | coord: 41..105
e-value: 1.7E-8
score: 44.3 |
| IPR004827 | Basic-leucine zipper domain | PFAM | PF00170 | bZIP_1 | coord: 42..102
e-value: 6.0E-11
score: 42.2 |
| IPR004827 | Basic-leucine zipper domain | PROSITE | PS00036 | BZIP_BASIC | coord: 48..63 |
| IPR004827 | Basic-leucine zipper domain | PROSITE | PS50217 | BZIP | coord: 43..99
score: 10.852 |
Blast
The following BLAST results are available for this feature:
|
