TCONS_00070497-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070497-protein
Unique NameTCONS_00070497-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length224

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070497-protein ID=TCONS_00070497-protein|Name=TCONS_00070497-protein|organism=Clytia hemisphaerica|type=polypeptide|length=224bp
MEFLSDGFFTRRHKVENVEYYLKESVKKMAERDVLIKRPAKVVSERNQMT
ESGIRDIFQLYGEGRGNSVQASQLRVIFEQMGFPMSDDHCENLIETADQD
GDGALDLKEFVNFVLYGVLNVEDTEDEIMECFRVFDPDETGFIPSQELRR
IMTQLGDELTDSEINKVIQQSDIDGDGSINYAEYVKKIYLSNHRYEAVNK
RDWENILAKMRNVSLENNTPEAEA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043888XLOC_043888Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070497TCONS_00070497Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 127..155
e-value: 1.7E-4
score: 30.9
coord: 163..191
e-value: 1.2
score: 17.2
coord: 89..117
e-value: 4.1
score: 12.8
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 82..114
e-value: 3.3E-6
score: 26.7
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 126..186
e-value: 8.5E-13
score: 48.5
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 49..84
score: 5.894
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 85..120
score: 11.445
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 159..194
score: 10.218
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 123..158
score: 14.402
IPR002048EF-hand domainCDDcd00051EFhcoord: 127..186
e-value: 1.01567E-13
score: 62.1801
NoneNo IPR availableGENE3D1.10.238.10coord: 103..142
e-value: 1.0E-15
score: 56.8
coord: 175..217
e-value: 0.0015
score: 17.9
NoneNo IPR availableGENE3D1.10.238.10coord: 10..102
e-value: 1.3E-13
score: 50.5
NoneNo IPR availableGENE3D1.10.238.10coord: 143..174
e-value: 2.6E-15
score: 55.7
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 98..110
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 172..184
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 44..203

Blast
[Close]
BLAST of TCONS_00070497-protein vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 7.571e-28
Identity = 51/143 (35.66%), Postives = 90/143 (62.94%), Query Frame = 0 
Query:   47 NQMTESGI---RDIFQLYGEGRGNSVQASQLRVIFEQMGFPMSDDHCENLIETADQDGDGALDLKEFVNFVLYGVLNVEDTEDEIMECFRVFDPDETGFIPSQELRRIMTQLGDELTDSEINKVIQQSDIDGDGSINYAEYVK 186
            +Q+TE  I   ++ F L+ +    ++   +L  +   +G   ++   +++I   D DG+G +D  EF+  +   + +  D+E+EI E FRVFD D  G+I + ELR +MT LG++LTD E++++I+++DIDGDG +NY E+V+
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT-DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
The following BLAST results are available for this feature:
BLAST of TCONS_00070497-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM37.571e-2835.66Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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