TCONS_00070514-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070514-protein
Unique NameTCONS_00070514-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length712

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070514-protein ID=TCONS_00070514-protein|Name=TCONS_00070514-protein|organism=Clytia hemisphaerica|type=polypeptide|length=712bp
MLTTPQEDNVEMKSMLNKLHNEYAIVVIGIGTKLTNDYLLSIANRGNRIL
KLRDLQELFPGKAAYKILVELLNDPDYDRYKTLAEAPRPDLGCEFVADIA
FLIDSSNSIRLEYLNQLQFVQFITASFGLKKNGTHAGVVVFSDIRPYSQL
EIKFDQYYDLKPFLEHVERLPFYAYRTRIDLAFEIADKELFSKAGGMRDN
VPKVIFLITDGSQNPTIDRRAGLTFDPVAASQPLIDRGIQIFSIGVGNRS
DNINYDELVKIARNENQVKIAETAADLASEQFVKELADITCRIIPTPPPK
PSCDVKVDVGFVLDSSGSLRDDYSKEKQFLKTLAAAFGVSEEGARAGVIT
FSYDTEHSIKLNDYFNIVSFSEAVDKIPLMGHTTRIDKXEAVDKIQLMGH
TTRIDKALRLTQSQMFSIANGGRPGVSKIVIVLTDGSQTQDVGAEDPGNV
AEELRSQGYKVLAVGIGDGVNRTELAHITGEKSAVYTASSFDDLISPEFV
GSMSKAGCEEAKKEVKPLCEVKVDVGFVLDSSGSLRNDYDKEKNFLKALA
ATFGVSEDGARAGVVTFSYDTEHSIKLNDHYDLFSFSDAVDKIPLMGHTT
RIDKALRLTQSQMFSIANGGRPGVSKIVIVLTDGSQTQDVGAEDPGNVAE
ELRSMGYKVLAVGIGSGVNSTELAHITGNKANVYSAVTFDELISQDFLGT
VNKAGCDEAKKE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043896XLOC_043896Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070514TCONS_00070514Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 261..281
NoneNo IPR availablePRINTSPR00453VWFADOMAINcoord: 627..635
score: 47.44
coord: 97..114
score: 40.28
coord: 561..575
score: 21.03
NoneNo IPR availableCDDcd01450vWFA_subfamily_ECMcoord: 523..684
e-value: 3.16991E-28
score: 110.459
NoneNo IPR availableCDDcd01450vWFA_subfamily_ECMcoord: 307..486
e-value: 9.4906E-27
score: 106.222
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 522..697
e-value: 4.7E-27
score: 105.9
coord: 306..499
e-value: 7.2E-23
score: 92.0
coord: 96..282
e-value: 6.9E-25
score: 98.7
IPR002035von Willebrand factor, type AGENE3D3.40.50.410coord: 96..294
e-value: 1.2E-22
score: 80.3
IPR002035von Willebrand factor, type AGENE3D3.40.50.410coord: 512..703
e-value: 3.6E-32
score: 111.3
IPR002035von Willebrand factor, type APFAMPF00092VWAcoord: 524..692
e-value: 3.3E-33
score: 115.3
coord: 98..273
e-value: 1.3E-24
score: 87.3
coord: 308..494
e-value: 2.1E-30
score: 106.2
IPR002035von Willebrand factor, type AGENE3D3.40.50.410coord: 304..511
e-value: 2.7E-30
score: 105.1
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 98..293
score: 22.105
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 524..701
score: 26.12
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 308..503
score: 25.997
IPR002035von Willebrand factor, type ASUPERFAMILY53300vWA-likecoord: 288..506
IPR002035von Willebrand factor, type ASUPERFAMILY53300vWA-likecoord: 518..708
IPR002035von Willebrand factor, type ASUPERFAMILY53300vWA-likecoord: 76..293

Blast
BLAST of TCONS_00070514-protein vs. Swiss-Prot (Human)
Match: CO6A5 (Collagen alpha-5(VI) chain OS=Homo sapiens GN=COL6A5 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 5.741e-40
Identity = 183/666 (27.48%), Postives = 300/666 (45.05%), Query Frame = 0
Query:   66 KILVELLNDPDYDRYKTLAEAPRPD-LGC--EFVADIAFLIDSSNSIRLEYLNQLQ-FVQFITASFGLKKNGTHAGVVVFSDIRPYSQLEIKFDQYYDLKPFLEHVERLPFYAYRTR-IDLAFEIADKELFSKAGGMRD---NVPKVIFLITDGSQNPTIDRRAGLTFDPVAASQPLIDRGIQIFSIGVGNRSDNINYDELVKIARNENQVKIAETAADLAS--EQFVKEL-ADITCRIIPTPPPKPSCDVKVDVGFVLDSSGSL-RDDYSKEKQFLKTLAAAFGVSEEGARAGVITFSYDTEHSIKLNDYFNIVSFSEAVDKIPLMGHTTRIDKXEAVDKIQLMGHTTRIDKALRLTQSQMFSIANGGRPGVSKIVIVLTDGSQTQDVGAEDPGNVAEELRSQGYKVLAVGIGDGVNRTELAHITGEKSAVYTASSFDDLISPEFVGSMSKAGCEEAKKEVKPLCEVK-------VDVGFVLDSSGSLRNDY-DKEKNFLKALAATFGVSEDGARAGVVTFSYDTEHSIKLNDHYDLFSFSDAVDKIPLMGHTTRIDKALRLTQSQMFSIANGGR--PGVSKIVIVLTDGSQTQDVGAEDPGNVAEELRSMGYKVLAVGIGSGVNSTELAHITGNKANVYSAVTFDELISQDFLGTVNKAGCDEA 709
            K L +L N+  + +  T AE    D  GC     ADI FLID S+SI+ +   Q++ F+  +T  F +  +    GVV +SD          +    DL+  + ++++L    Y  + +D   +I          GM+D    VP  + ++TDG    + DR        V  ++ L    I + ++G+G      N  EL +IA  E +V   +    L S   + V+E+ A+  C            D+K D+ F++DSS S+  +++ K K F+K L     +  +  + GV+ FS  T+   +LN YF                  T+ +  +A+D++ L+   T   KAL     Q F+ + G R G  K +I++TDG    DV   DP  +   LR +   + +VG+ +  NR++L  I+G+ S V+   +FD L + E             +K +  +C +        +DV FVLD SGS++  Y D   N    L     V  D  + G + +S        LN + +  +  + + K    G  T   KAL+   + +F+  +G R    V +++IV+TDG ++ D   +   + A ELR+ G  + AVG+G   N  EL  + GNK N      FD+L  +D    V +  C EA
Sbjct:  408 KFLKKLQNEI-WSQISTYAEQRNLDKTGCVDTKEADIHFLIDGSSSIQEKQFEQIKRFMLEVTEMFSIGPDKVRVGVVQYSDDTEVEFYITDYSNDIDLRKAIFNIKQLTGGTYTGKALDYILQIIKN-------GMKDRMSKVPCYLIVLTDGM---STDR-------VVEPAKRLRAEQITVHAVGIGA----ANKIELQEIAGKEERVSFGQNFDALKSIKNEVVREICAEKGCE-----------DMKADIMFLVDSSWSIGNENFRKMKIFMKNLLTKIQIGADKTQIGVVQFSDKTKEEFQLNRYF------------------TQQEISDAIDRMSLINEGTLTGKALNFV-GQYFTHSKGARLGAKKFLILITDGVAQDDV--RDPARI---LRGKDVTIFSVGVYN-ANRSQLEEISGDSSLVFHVENFDHLKALE-------------RKLIFRVCALHDCKRITLLDVVFVLDHSGSIKKQYQDHMINLTIHLVKKADVGRDRVQFGALKYSDQPNILFYLNTYSNRSAIIENLRKRRDTGGNTYTAKALKHANA-LFTEEHGSRIKQNVKQMLIVITDG-ESHD--HDQLNDTALELRNKGITIFAVGVGK-ANQKELEGMAGNKNNTIYVDNFDKL--KDVFTLVQERMCTEA 995          

HSP 2 Score: 157.918 bits (398), Expect = 9.723e-40
Identity = 167/617 (27.07%), Postives = 288/617 (46.68%), Query Frame = 0
Query:   96 VADIAFLIDSSNSIRLEYLNQLQFVQFITASFGLKKNGTHAGVVVFSDIRPYSQLEIKFDQYYDLKP-FLEHVERLPFYAYRTRIDLAFEIADKELFSKAGGMR--DNVPKVIFLITDGSQNPTIDRRAGLTFDPVAASQPLIDRGIQIFSIGVGNRSDNINYDELVKIARNENQVKIAETAADLA--SEQFVKELADITCRIIPTPPPKPSCDV-------KVDVGFVLDSSGSLRD-DYSKEKQFLKTLAAAFGVSEEGARAGVITFSYDTEHSIKLNDYFNIVSFSEAVDKIPLMGHTTRIDKXEAVDKIQLMGHTTRIDKALRLTQSQMFSIANGGRPGVSKI---VIVLTDGSQTQDVGAEDPGNVAEELRSQGYKVLAVGIGDGVNRTELAHITGEKSAVYTASSFDDL--ISPEFVGSM-SKAGCEEAKKEVKPLCEVKVDVGFVLDSSGSLRND-YDKEKNFLKALAATFGVSEDGARAGVVTFSYDTEHSIKLNDHYDLFSFSDAVDKIPLMGHTTRIDKALRLTQSQMFSIANGGRPGVSKIVIVLTDGSQTQDVGAEDPGNVAEELRSMGYKVLAVGIGSGVNSTELAHITGNKANVYSAVTFDEL 692
            +AD+ FL+D S        +   F++ IT+S  +K+N    G++ +S+    S   I F +    +  F + ++ L     ++    A +   ++ FS++ G R    VP++  L+T     P+ D          A +  L D  + +F++ +   ++N   +E+V     E  +   ++ ADL   S +F+K+L +     I T   + + D        + D+ F++D S S+++  + + K+F+  +   F +  +  R GV+ +S DTE    + DY N +   +A+  I  +   T   K               +D  L++       I NG +  +SK+   +IVLTDG  T  V   +P   A+ LR++   V AVGIG   N+ EL  I G++  V    +FD L  I  E V  + ++ GCE+          +K D+ F++DSS S+ N+ + K K F+K L     +  D  + GVV FS  T+   +LN ++     SDA+D++ L+   T   KAL     Q F+ + G R G  K +I++TDG    DV   DP  +   LR     + +VG+    N ++L  I+G+ + V+    FD L
Sbjct:  234 LADLVFLVDESLGTGGNLRHLQTFLENITSSMDVKENCMRLGLMSYSN----SAKTISFLKSSTTQSEFQQQIKNLSIQVGKSNTGAAIDQMRRDGFSESYGSRRAQGVPQIAVLVT---HRPSDDE-----VHDAALNLRLED--VNVFALSI-QGANNTQLEEIVSYP-PEQTISTLKSYADLETYSTKFLKKLQNEIWSQISTYAEQRNLDKTGCVDTKEADIHFLIDGSSSIQEKQFEQIKRFMLEVTEMFSIGPDKVRVGVVQYSDDTEVEFYITDYSNDIDLRKAIFNIKQLTGGTYTGKA--------------LDYILQI-------IKNGMKDRMSKVPCYLIVLTDGMSTDRV--VEP---AKRLRAEQITVHAVGIG-AANKIELQEIAGKEERVSFGQNFDALKSIKNEVVREICAEKGCED----------MKADIMFLVDSSWSIGNENFRKMKIFMKNLLTKIQIGADKTQIGVVQFSDKTKEEFQLNRYFTQQEISDAIDRMSLINEGTLTGKALNFV-GQYFTHSKGARLGAKKFLILITDGVAQDDV--RDPARI---LRGKDVTIFSVGV-YNANRSQLEEISGDSSLVFHVENFDHL 790          
The following BLAST results are available for this feature:
BLAST of TCONS_00070514-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CO6A55.741e-4027.48Collagen alpha-5(VI) chain OS=Homo sapiens GN=COL6... [more]
back to top