Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00070514-protein ID=TCONS_00070514-protein|Name=TCONS_00070514-protein|organism=Clytia hemisphaerica|type=polypeptide|length=712bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00070514-protein vs. Swiss-Prot (Human)
Match: CO6A5 (Collagen alpha-5(VI) chain OS=Homo sapiens GN=COL6A5 PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 5.741e-40 Identity = 183/666 (27.48%), Postives = 300/666 (45.05%), Query Frame = 0 Query: 66 KILVELLNDPDYDRYKTLAEAPRPD-LGC--EFVADIAFLIDSSNSIRLEYLNQLQ-FVQFITASFGLKKNGTHAGVVVFSDIRPYSQLEIKFDQYYDLKPFLEHVERLPFYAYRTR-IDLAFEIADKELFSKAGGMRD---NVPKVIFLITDGSQNPTIDRRAGLTFDPVAASQPLIDRGIQIFSIGVGNRSDNINYDELVKIARNENQVKIAETAADLAS--EQFVKEL-ADITCRIIPTPPPKPSCDVKVDVGFVLDSSGSL-RDDYSKEKQFLKTLAAAFGVSEEGARAGVITFSYDTEHSIKLNDYFNIVSFSEAVDKIPLMGHTTRIDKXEAVDKIQLMGHTTRIDKALRLTQSQMFSIANGGRPGVSKIVIVLTDGSQTQDVGAEDPGNVAEELRSQGYKVLAVGIGDGVNRTELAHITGEKSAVYTASSFDDLISPEFVGSMSKAGCEEAKKEVKPLCEVK-------VDVGFVLDSSGSLRNDY-DKEKNFLKALAATFGVSEDGARAGVVTFSYDTEHSIKLNDHYDLFSFSDAVDKIPLMGHTTRIDKALRLTQSQMFSIANGGR--PGVSKIVIVLTDGSQTQDVGAEDPGNVAEELRSMGYKVLAVGIGSGVNSTELAHITGNKANVYSAVTFDELISQDFLGTVNKAGCDEA 709 K L +L N+ + + T AE D GC ADI FLID S+SI+ + Q++ F+ +T F + + GVV +SD + DL+ + ++++L Y + +D +I GM+D VP + ++TDG + DR V ++ L I + ++G+G N EL +IA E +V + L S + V+E+ A+ C D+K D+ F++DSS S+ +++ K K F+K L + + + GV+ FS T+ +LN YF T+ + +A+D++ L+ T KAL Q F+ + G R G K +I++TDG DV DP + LR + + +VG+ + NR++L I+G+ S V+ +FD L + E +K + +C + +DV FVLD SGS++ Y D N L V D + G + +S LN + + + + + K G T KAL+ + +F+ +G R V +++IV+TDG ++ D + + A ELR+ G + AVG+G N EL + GNK N FD+L +D V + C EA Sbjct: 408 KFLKKLQNEI-WSQISTYAEQRNLDKTGCVDTKEADIHFLIDGSSSIQEKQFEQIKRFMLEVTEMFSIGPDKVRVGVVQYSDDTEVEFYITDYSNDIDLRKAIFNIKQLTGGTYTGKALDYILQIIKN-------GMKDRMSKVPCYLIVLTDGM---STDR-------VVEPAKRLRAEQITVHAVGIGA----ANKIELQEIAGKEERVSFGQNFDALKSIKNEVVREICAEKGCE-----------DMKADIMFLVDSSWSIGNENFRKMKIFMKNLLTKIQIGADKTQIGVVQFSDKTKEEFQLNRYF------------------TQQEISDAIDRMSLINEGTLTGKALNFV-GQYFTHSKGARLGAKKFLILITDGVAQDDV--RDPARI---LRGKDVTIFSVGVYN-ANRSQLEEISGDSSLVFHVENFDHLKALE-------------RKLIFRVCALHDCKRITLLDVVFVLDHSGSIKKQYQDHMINLTIHLVKKADVGRDRVQFGALKYSDQPNILFYLNTYSNRSAIIENLRKRRDTGGNTYTAKALKHANA-LFTEEHGSRIKQNVKQMLIVITDG-ESHD--HDQLNDTALELRNKGITIFAVGVGK-ANQKELEGMAGNKNNTIYVDNFDKL--KDVFTLVQERMCTEA 995 HSP 2 Score: 157.918 bits (398), Expect = 9.723e-40 Identity = 167/617 (27.07%), Postives = 288/617 (46.68%), Query Frame = 0 Query: 96 VADIAFLIDSSNSIRLEYLNQLQFVQFITASFGLKKNGTHAGVVVFSDIRPYSQLEIKFDQYYDLKP-FLEHVERLPFYAYRTRIDLAFEIADKELFSKAGGMR--DNVPKVIFLITDGSQNPTIDRRAGLTFDPVAASQPLIDRGIQIFSIGVGNRSDNINYDELVKIARNENQVKIAETAADLA--SEQFVKELADITCRIIPTPPPKPSCDV-------KVDVGFVLDSSGSLRD-DYSKEKQFLKTLAAAFGVSEEGARAGVITFSYDTEHSIKLNDYFNIVSFSEAVDKIPLMGHTTRIDKXEAVDKIQLMGHTTRIDKALRLTQSQMFSIANGGRPGVSKI---VIVLTDGSQTQDVGAEDPGNVAEELRSQGYKVLAVGIGDGVNRTELAHITGEKSAVYTASSFDDL--ISPEFVGSM-SKAGCEEAKKEVKPLCEVKVDVGFVLDSSGSLRND-YDKEKNFLKALAATFGVSEDGARAGVVTFSYDTEHSIKLNDHYDLFSFSDAVDKIPLMGHTTRIDKALRLTQSQMFSIANGGRPGVSKIVIVLTDGSQTQDVGAEDPGNVAEELRSMGYKVLAVGIGSGVNSTELAHITGNKANVYSAVTFDEL 692 +AD+ FL+D S + F++ IT+S +K+N G++ +S+ S I F + + F + ++ L ++ A + ++ FS++ G R VP++ L+T P+ D A + L D + +F++ + ++N +E+V E + ++ ADL S +F+K+L + I T + + D + D+ F++D S S+++ + + K+F+ + F + + R GV+ +S DTE + DY N + +A+ I + T K +D L++ I NG + +SK+ +IVLTDG T V +P A+ LR++ V AVGIG N+ EL I G++ V +FD L I E V + ++ GCE+ +K D+ F++DSS S+ N+ + K K F+K L + D + GVV FS T+ +LN ++ SDA+D++ L+ T KAL Q F+ + G R G K +I++TDG DV DP + LR + +VG+ N ++L I+G+ + V+ FD L Sbjct: 234 LADLVFLVDESLGTGGNLRHLQTFLENITSSMDVKENCMRLGLMSYSN----SAKTISFLKSSTTQSEFQQQIKNLSIQVGKSNTGAAIDQMRRDGFSESYGSRRAQGVPQIAVLVT---HRPSDDE-----VHDAALNLRLED--VNVFALSI-QGANNTQLEEIVSYP-PEQTISTLKSYADLETYSTKFLKKLQNEIWSQISTYAEQRNLDKTGCVDTKEADIHFLIDGSSSIQEKQFEQIKRFMLEVTEMFSIGPDKVRVGVVQYSDDTEVEFYITDYSNDIDLRKAIFNIKQLTGGTYTGKA--------------LDYILQI-------IKNGMKDRMSKVPCYLIVLTDGMSTDRV--VEP---AKRLRAEQITVHAVGIG-AANKIELQEIAGKEERVSFGQNFDALKSIKNEVVREICAEKGCED----------MKADIMFLVDSSWSIGNENFRKMKIFMKNLLTKIQIGADKTQIGVVQFSDKTKEEFQLNRYFTQQEISDAIDRMSLINEGTLTGKALNFV-GQYFTHSKGARLGAKKFLILITDGVAQDDV--RDPARI---LRGKDVTIFSVGV-YNANRSQLEEISGDSSLVFHVENFDHL 790 The following BLAST results are available for this feature:
BLAST of TCONS_00070514-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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