Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00070525-protein ID=TCONS_00070525-protein|Name=TCONS_00070525-protein|organism=Clytia hemisphaerica|type=polypeptide|length=842bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00070525-protein vs. Swiss-Prot (Human)
Match: HMCN1 (Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 2.756e-25 Identity = 63/171 (36.84%), Postives = 86/171 (50.29%), Query Frame = 0 Query: 601 FGGWSMFSPCTATCGTATKIRYRIL---VSEDFGI----KEFDTQPCNLTNCPIDGQWSEWPGYGRCNVSCGNGMKNRTRECNNPRKQYGGRDCMGVPIEFQRCGDPPICPVHGGWTQYEKFSDCSAPCRYGNDTVTETWVRHCTDPTPDLGGRNCDGSKWKYVPCQVEEC 764 F WS + C+ TCG + R R+ + + G + + + C CP+DG WSEW + C SCG G + RTR CNNP Q+GGR C G +E C P CPVHG W+ ++ + CS C G T+T R C +P P GG CDG++ + C C Sbjct: 4532 FSQWSAWRACSVTCGKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKPCPVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRP-CPVHGAWSAWQPWGTCSESCGKG----TQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNC 4697 HSP 2 Score: 106.301 bits (264), Expect = 3.461e-23 Identity = 70/195 (35.90%), Postives = 93/195 (47.69%), Query Frame = 0 Query: 584 NADHKRVCNCVPTGENTFGGWSMFSP---CTATCGTATKIRYRILVSE--DFGIK-----EFDTQPCNLTNCPIDGQWSEWPGYGRCNVSCGNGMKNRTRECNNPRKQYGGRDCMGVPIEFQRCGDPPICPVHGGWTQYEKFSDCSAPCRYGNDTVTETWVRHCTDPTPDLGGRNCDGSKWKYVPCQVEECAPVE 768 NA +CN P G WS + P C+ +CG T+ R R+ + FG E Q CN NCPI G+W+ W + C+VSCG G + RTR C++P QYGGR C G ++ C P CP HG W+ + + CS C G R C +P P GGR C G + C + C PV+ Sbjct: 4628 NAVEIIMCNIRPC--PVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDP-CPTHGNWSPWSGWGTCSRTCNGGQ----MRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMC-PVD 4814 HSP 3 Score: 102.449 bits (254), Expect = 5.991e-22 Identity = 60/168 (35.71%), Postives = 81/168 (48.21%), Query Frame = 0 Query: 604 WSMFSPCTATCGTATKIRYRIL--VSEDFGIK-----EFDTQPCNLTNCPIDGQWSEWPGYGRCNVSCGNGMKNRTRECNNPRKQYGGRDCMGVPIEFQRCGDPPICPVHGGWTQYEKFSDCSAPCRYGNDTVTETWVRHCTDPTPDLGGRNCDGSKWKYVPCQVEEC 764 WS++ CT +CG + R R S G + + CN+ CP+ G WS W +G C+ SCG G + R R CNNP +GG C G + Q C + CP+HG W + +S CS C G T R C+DP P GGR C+GS + C + C Sbjct: 4592 WSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERN-CPIHGKWATWASWSACSVSCGGGARQRT----RGCSDPVPQYGGRKCEGSDVQSDFCNSDPC 4754 HSP 4 Score: 87.8113 bits (216), Expect = 1.744e-17 Identity = 41/118 (34.75%), Postives = 67/118 (56.78%), Query Frame = 0 Query: 647 IDGQWSEWPGYGRCNVSCGNGMKNRTRECNNPRKQYGGRDCMGVPIEFQRCGDPPICPVHGGWTQYEKFSDCSAPCRYGNDTVTETWVRHCTDPTPDLGGRNCDGSKWKYVPCQVEEC 764 + G +S+W + C+V+CG G++ R+R CN P GG+ C G +E + C + P CPV G W+++ + +C+ C GN T T T C +P+ GGR C+G+ + + C + C Sbjct: 4528 VHGGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKP-CPVDGSWSEWSLWEECTRSCGRGNQTRTRT----CNNPSVQHGGRPCEGNAVEIIMCNIRPC 4640 The following BLAST results are available for this feature:
BLAST of TCONS_00070525-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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