TCONS_00070547-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00070547-protein
Unique Name	TCONS_00070547-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	616

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00070547-protein ID=TCONS_00070547-protein|Name=TCONS_00070547-protein|organism=Clytia hemisphaerica|type=polypeptide|length=616bp
GMTTDKHFASLLLLVTQLQSHVTSVGPTDALNFNIYEDFHLDEARKARGI
LEKFDGFVEQLLCEFEDHPALLQIRKLIERVLSLSICSPLMKFVTGFELL
LKQSQDWEAYAGSHVSLKNHLEDVTRQIVLWRKMELKTWQNLLQKSEQKM
EDSVAKWMFHFWNLLQEIETSDDETNCKEKKDEYFQALRQFFESGNIGDF
ESRIELVVIFFKYICQLDETQDLQRVTWNSLQYYSQFLPAVNQHKLALKK
PIEKELKDYVKIAKWSDINYYALKLAVEKSHRTLTKFVRKYEGVLNEPIT
QFLQDATKQTKPSEIQKNFHIKLLQDNLTFAIVKPPSEKEGYLAKTDSLC
HKMRKHFETVKSNTMYGDLIEGIDEMTGDIIESIQDFQKENPLSLPKEKQ
KEARSNLQQRKRKALATLFKELKMIGISYRIGNIDVTEEATLFQSPKLES
KLASWNDIRECIDTCNFYYFQSVARNALFHNALCAPCKEIGPNEIARFKG
LTSFLMTSAFNQRKDLDELLVNENRISTLIESLSEIQRSSDQKETILPCQ
TTTKHWLYTINETIYMAEHHLNDFTNLINTCPEDNQFSFPFLKEELSEME
LSVRNEKIVLDAVTTA

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_043905	XLOC_043905	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00070547	TCONS_00070547	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 397..417
None	No IPR available	COILS	Coil	Coil	coord: 136..156

Blast

[Close]

BLAST of TCONS_00070547-protein vs. Swiss-Prot (Human)
Match: MDN1 (Midasin OS=Homo sapiens GN=MDN1 PE=1 SV=2)

HSP 1 Score: 270.781 bits (691), Expect = 5.000e-78
Identity = 183/636 (28.77%), Postives = 316/636 (49.69%), Query Frame = 0

Query:    5 DKHFASLLLLVTQLQSHVTSVGPTDAL-----NFNIYEDFHLDEARKARGILEKFDGFVEQLLCEFEDHPALLQIRKLIERVLSLSICSPLMKFVTGFELLLKQSQDWEAYAGSHVSLKNHLEDVTRQIVLWRKMELKTWQNLLQKSEQKMEDSVAKWMFHFWNLLQ---EIETSDDETNCKEKKDEYFQALRQFFESGNIGDFESRIELVVIFFKYIC---QLDETQDLQRVTWNSLQYYSQFLPAVNQHKLALKKPIEKELKDYVKIAKWSDINYYALKLAVEKSHRTLTKFVRKYEGVLNEPITQFLQDATKQTKP--------------SEIQ---KNFHIKLLQDNLTFAIVKP-------PSEKEG-YLAKTDSLCHKMRKHFETVKSNTMYGDLIEGIDEMTGDIIESIQDFQ--KENPLSLPKEKQKEARSNLQQRKRKALATLFKELKMIGISYRIG----------------NIDVTEEATLFQSPK-LESKLASWNDIRECIDTCNFYYFQSVARNALFHNALCAPCKEIGPNEIARFKGLTSFLMTSAFNQRKDLDELLVNENRISTLIESLSEIQR---SSDQKETILPCQTTTKHWLYTINETIYMAEHHLNDFTNLINTCP 582
            D+   S LL  T   + +    P+D +      ++ Y+  ++ EAR+ + +L+ F   V  LL ++ +HPAL Q+  +++R+ S  + SP+ KF+ G E+LL ++QDWE  A   +SL+ HL+ +++ I+ WRK+EL  W   L  + ++  +   K  F  + +L+   + +T + E + +         L+ F E  ++G+F  R++++++F  ++    Q++    L  V WN   YY QF   V    + L+ P+EKELK++VKI+KW+D++++++K +VEK+HRTL KF++K+E VL+EP    L ++ K+ +P              S IQ   +     LL          P       PS  EG  L +   L  +MRK   T    +    L+EG+D+ TG++I S+ + Q  K  P S  KEKQ+    ++  +K++AL+ LFK L  IG+SYR G                 +D+    ++  S +  +S+L +  +I    D C  Y+++S+AR+A  + AL  P KE+G   + R +G ++ LM     QR+ L  L      +  L+  + EI              P Q   + W   +       +  L   + L+  CP
Sbjct: 3680 DRLLGSQLLACTLSHNTLFGEAPSDLMVKPDGPYDFYQHPNVPEARQCQPVLQGFSEAVSHLLQDWPEHPALEQLLVVMDRIRSFPLSSPISKFLNGLEILLAKAQDWEENASRALSLRKHLDLISQMIIRWRKLELNCWSMSLDNTMKRHTEKSTKHWFSIYQMLEKHMQEQTEEQEDDKQMTLMLLVSTLQAFIEGSSLGEFHVRLQMLLVFHCHVLLMPQVEGKDSLCSVLWNLYHYYKQFFDRVQAKIVELRSPLEKELKEFVKISKWNDVSFWSIKQSVEKTHRTLFKFMKKFEAVLSEPCRSSLVESDKEEQPDFLPRPTDGAASELSSIQNLNRALRETLLAQPAAGQATIPEWCQGAAPSGLEGELLRRLPKLRKRMRKMCLTFMKESPLPRLVEGLDQFTGEVISSVSELQSLKVEP-SAEKEKQRSEAKHILMQKQRALSDLFKHLAKIGLSYRKGLAWARSKNPQEMLHLHPLDLQSALSIVSSTQEADSRLLT--EISSSWDGCQKYFYRSLARHARLNAALATPAKEMGMGNVERCRGFSAHLMKMLVRQRRSLTTLSEQWIILRNLLSCVQEIHSRLMGPQAYPVAFPPQDGVQQWTERLQHLAMQCQILLEQLSWLLQCCP 4312

The following BLAST results are available for this feature:

BLAST of TCONS_00070547-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00070547-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MDN1	5.000e-78	28.77	Midasin OS=Homo sapiens GN=MDN1 PE=1 SV=2	[more]

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TCONS_00070547-protein (polypeptide) - C. hemisphaerica