TCONS_00070590-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070590-protein
Unique NameTCONS_00070590-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length434

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070590-protein ID=TCONS_00070590-protein|Name=TCONS_00070590-protein|organism=Clytia hemisphaerica|type=polypeptide|length=434bp
RSQTCVEAPNNEQKQRFAETREENMVQQKISDERKSYAEGLTIHGLNRIV
VGGSLNRIVWTILVIASFIVAVLISKDHFDAYLTRQSRTNSRFVTEKTIP
FPTISVCDRKGLIREKENFEGSAPLFPRPIITNRDLFECGKNMTSCQYNQ
SAFVNVEYYTGDYVYLKSLTGFVEIDNFTNCFTFRGLTQKLPSNLVSITM
STKRMENNYWNEVFVNTPSETFHEATGLAHWTNDGFYNIKIRKRIIKLLG
LPYSDCVKGPGSHSQNKFKGNYTVTKCKKGCYLERVFQQCGAIPPMYKKH
LREPRQFENKTLVNNTFGKACMNTIMNDEKVTSICDSLCELRPCYEEQII
TEAEFNPFIVPNLADIAFSFPSFMVEIIEEVPAYTWQDLFSNFGGCVGLM
TGASILSLFELGIFLGLLIFDYFDIYTKFWSSRK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043931XLOC_043931Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070590TCONS_00070590Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001873ENaC
Vocabulary: Biological Process
TermDefinition
GO:0006814sodium ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005272sodium channel activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006814 sodium ion transport
cellular_component GO:0016020 membrane
molecular_function GO:0005272 sodium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.770coord: 357..421
e-value: 5.7E-13
score: 48.2
NoneNo IPR availableGENE3D1.10.287.820coord: 248..356
e-value: 8.9E-6
score: 25.8
NoneNo IPR availableGENE3D1.10.287.770coord: 42..227
e-value: 0.0034
score: 17.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
IPR001873Epithelial sodium channelPFAMPF00858ASCcoord: 137..413
e-value: 1.8E-23
score: 83.2
coord: 37..110
e-value: 8.0E-11
score: 41.4

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070590-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top