TCONS_00070596-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070596-protein
Unique NameTCONS_00070596-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length362

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070596-protein ID=TCONS_00070596-protein|Name=TCONS_00070596-protein|organism=Clytia hemisphaerica|type=polypeptide|length=362bp
MSDENEDIIVINPDSTAGSTEFHFDPPSFLIGNADCSEKTTNNIIKNEKY
KGFLILQSNEGTTNQQNNDIEHEETFTCDVCDKSFPSRSKLKRHGYTHTR
VKRFVCSICHKTFNQSYHLNVHMNSHTGIKPYECKECGKFFRQKINLKRH
TATHEGIKPFKCDICDKTYALKVDLNRHLKTHTDVKSYGCGVCGKTFARK
CNLTQHLGTHEKEKKFECKECGKCFAQKAHLERHINNHKGIKPFKCDICD
KMFAVKADISIHLKTHADVKPHGCGVCGKTFSQKSNLTHHLTTHENEKKF
ECKECGKRYRWKRDFEKHMFTHQTSVESAPDETIGTLVSMTIILDINKKC
SYSKLDCHNFDL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043936XLOC_043936Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070596TCONS_00070596Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 132..154
e-value: 7.4E-4
score: 28.8
coord: 300..322
e-value: 0.0013
score: 28.0
coord: 160..182
e-value: 5.0E-4
score: 29.4
coord: 104..126
e-value: 0.0028
score: 26.9
coord: 244..266
e-value: 0.011
score: 24.9
coord: 272..294
e-value: 0.012
score: 24.8
coord: 188..210
e-value: 0.011
score: 25.0
coord: 216..238
e-value: 0.0022
score: 27.2
coord: 76..98
e-value: 0.0066
score: 25.7
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 162..182
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 274..294
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 302..322
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 190..210
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 78..98
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 218..238
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 106..126
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 246..266
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 134..154
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 244..271
score: 12.653
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 76..103
score: 12.404
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 216..243
score: 15.313
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 300..327
score: 10.616
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 188..215
score: 13.318
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 272..299
score: 13.588
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 104..131
score: 14.129
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 132..159
score: 15.23
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 160..187
score: 12.258
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 225..281
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 270..322
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 169..225
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 75..126
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 112..169
NoneNo IPR availableGENE3D2.20.28.10coord: 282..302
e-value: 3.6E-12
score: 45.5
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 244..266
e-value: 0.0049
score: 17.2
coord: 76..98
e-value: 5.2E-5
score: 23.4
coord: 216..238
e-value: 4.9E-6
score: 26.6
coord: 190..210
e-value: 3.9E-4
score: 20.6
coord: 274..294
e-value: 3.0E-5
score: 24.1
coord: 132..154
e-value: 1.6E-5
score: 25.0
coord: 104..126
e-value: 1.3E-5
score: 25.3
coord: 160..182
e-value: 2.6E-4
score: 21.2
coord: 300..322
e-value: 0.013
score: 15.9
NoneNo IPR availableGENE3D3.30.60.60coord: 11..82
e-value: 0.0021
score: 17.8
NoneNo IPR availableGENE3D3.30.160.60coord: 228..254
e-value: 6.9E-18
score: 64.0
NoneNo IPR availableGENE3D2.10.69.10coord: 170..201
e-value: 3.4E-18
score: 65.1
NoneNo IPR availableGENE3D2.20.28.30coord: 144..169
e-value: 2.5E-19
score: 68.8
coord: 255..281
e-value: 1.7E-16
score: 59.8
NoneNo IPR availableGENE3D3.30.160.60coord: 83..94
e-value: 9.6E-7
score: 28.3
NoneNo IPR availableGENE3D3.30.160.60coord: 119..143
e-value: 1.5E-18
score: 66.4
coord: 202..227
e-value: 2.6E-17
score: 62.5
NoneNo IPR availableGENE3D3.30.160.60coord: 95..118
e-value: 1.3E-17
score: 63.0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 303..328
e-value: 7.9E-7
score: 28.8

Blast
BLAST of TCONS_00070596-protein vs. Swiss-Prot (Human)
Match: OZF (Zinc finger protein OZF OS=Homo sapiens GN=ZNF146 PE=1 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 1.126e-67
Identity = 113/250 (45.20%), Postives = 148/250 (59.20%), Query Frame = 0
Query:   73 EETFTCDVCDKSFPSRSKLKRHGYTHTRVKRFVCSICHKTFNQSYHLNVHMNSHTGIKPYECKECGKFFRQKINLKRHTATHEGIKPFKCDICDKTYALKVDLNRHLKTHTDVKSYGCGVCGKTFARKCNLTQHLGTHEKEKKFECKECGKCFAQKAHLERHINNHKGIKPFKCDICDKMFAVKADISIHLKTHADVKPHGCGVCGKTFSQKSNLTHHLTTHENEKKFECKECGKRYRWKRDFEKHMFTH 322
            E  F C VC K F  +S L  H + HTR K F C+ C K F+Q  ++  H N+HTG K +EC ECGK F QK NL  H   H G KPF+C  C K +  K +L RH +THT  K + C  CGKTF+ K NLT+H   H  EK F+C ECG  F QK +L +H N H G KP++C+ C K F+ +  + +H++ H+  KP+ C VCGK FSQ S+LT H+ +H  EK + C ECGK +        H+  H
Sbjct:   13 ENPFACKVCGKVFSHKSNLTEHEHFHTREKPFECNECGKAFSQKQYVIKHQNTHTGEKLFECNECGKSFSQKENLLTHQKIHTGEKPFECKDCGKAFIQKSNLIRHQRTHTGEKPFVCKECGKTFSGKSNLTEHEKIHIGEKPFKCSECGTAFGQKKYLIKHQNIHTGEKPYECNECGKAFSQRTSLIVHVRIHSGDKPYECNVCGKAFSQSSSLTVHVRSHTGEKPYGCNECGKAFSQFSTLALHLRIH 262          

HSP 2 Score: 209.534 bits (532), Expect = 1.315e-65
Identity = 107/250 (42.80%), Postives = 147/250 (58.80%), Query Frame = 0
Query:   73 EETFTCDVCDKSFPSRSKLKRHGYTHTRVKRFVCSICHKTFNQSYHLNVHMNSHTGIKPYECKECGKFFRQKINLKRHTATHEGIKPFKCDICDKTYALKVDLNRHLKTHTDVKSYGCGVCGKTFARKCNLTQHLGTHEKEKKFECKECGKCFAQKAHLERHINNHKGIKPFKCDICDKMFAVKADISIHLKTHADVKPHGCGVCGKTFSQKSNLTHHLTTHENEKKFECKECGKRYRWKRDFEKHMFTH 322
            E+ F C+ C K+F  +  + +H  THT  K F C+ C K+F+Q  +L  H   HTG KP+ECK+CGK F QK NL RH  TH G KPF C  C KT++ K +L  H K H   K + C  CG  F +K  L +H   H  EK +EC ECGK F+Q+  L  H+  H G KP++C++C K F+  + +++H+++H   KP+GC  CGK FSQ S L  HL  H  +K ++C ECGK +  K    +H   H
Sbjct:   41 EKPFECNECGKAFSQKQYVIKHQNTHTGEKLFECNECGKSFSQKENLLTHQKIHTGEKPFECKDCGKAFIQKSNLIRHQRTHTGEKPFVCKECGKTFSGKSNLTEHEKIHIGEKPFKCSECGTAFGQKKYLIKHQNIHTGEKPYECNECGKAFSQRTSLIVHVRIHSGDKPYECNVCGKAFSQSSSLTVHVRSHTGEKPYGCNECGKAFSQFSTLALHLRIHTGKKPYQCSECGKAFSQKSHHIRHQKIH 290          

HSP 3 Score: 155.221 bits (391), Expect = 9.903e-45
Identity = 84/197 (42.64%), Postives = 109/197 (55.33%), Query Frame = 0
Query:  126 HTGIKPYECKECGKFFRQKINLKRHTATHEGIKPFKCDICDKTYALKVDLNRHLKTHTDVKSYGCGVCGKTFARKCNLTQHLGTHEKEKKFECKECGKCFAQKAHLERHINNHKGIKPFKCDICDKMFAVKADISIHLKTHADVKPHGCGVCGKTFSQKSNLTHHLTTHENEKKFECKECGKRYRWKRDFEKHMFTH 322
            ++G  P+ CK CGK F  K NL  H   H   KPF+C+ C K ++ K  + +H  THT  K + C  CGK+F++K NL  H   H  EK FECK+CGK F QK++L RH   H G KPF C  C K F+ K++++ H K H   KP  C  CG  F QK  L  H   H  EK +EC ECGK +  +     H+  H
Sbjct:   10 YSGENPFACKVCGKVFSHKSNLTEHEHFHTREKPFECNECGKAFSQKQYVIKHQNTHTGEKLFECNECGKSFSQKENLLTHQKIHTGEKPFECKDCGKAFIQKSNLIRHQRTHTGEKPFVCKECGKTFSGKSNLTEHEKIHIGEKPFKCSECGTAFGQKKYLIKHQNIHTGEKPYECNECGKAFSQRTSLIVHVRIH 206          

HSP 4 Score: 92.8189 bits (229), Expect = 1.671e-21
Identity = 48/111 (43.24%), Postives = 63/111 (56.76%), Query Frame = 0
Query:   73 EETFTCDVCDKSFPSRSKLKRHGYTHTRVKRFVCSICHKTFNQSYHLNVHMNSHTGIKPYECKECGKFFRQKINLKRHTATHEGIKPFKCDICDKTYALKVDLNRHLKTHT 183
            E+ + C+ C K+F  R+ L  H   H+  K + C++C K F+QS  L VH+ SHTG KPY C ECGK F Q   L  H   H G KP++C  C K ++ K    RH K HT
Sbjct:  181 EKPYECNECGKAFSQRTSLIVHVRIHSGDKPYECNVCGKAFSQSSSLTVHVRSHTGEKPYGCNECGKAFSQFSTLALHLRIHTGKKPYQCSECGKAFSQKSHHIRHQKIHT 291          
The following BLAST results are available for this feature:
BLAST of TCONS_00070596-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OZF1.126e-6745.20Zinc finger protein OZF OS=Homo sapiens GN=ZNF146 ... [more]
back to top