TCONS_00070677-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070677-protein
Unique NameTCONS_00070677-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length577

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070677-protein ID=TCONS_00070677-protein|Name=TCONS_00070677-protein|organism=Clytia hemisphaerica|type=polypeptide|length=577bp
MAEGNNEIDSPKGAERFRNAARKVSKLSATVDIWQQQAKTLKSGLDIPTV
PRQRRMSVMDSFKSAVDKVKMKKKIASFLEPEYDPSIFRTIFQLGEDNGR
RVTVFQETLDDQKPYVHLRDLPPMSNNEVAEFVSKELVGKVVESRCFRFT
ILFLIIVNSLLIMLETDRTLEREWGRAFKIMDEIIMSVFICEILLKWYHG
FFKFFTQGWNILDFLIVLSLIVGPMIMGGSGGQNVLRILRVLRAFRSLRS
ISSLPGLQVVVQTILQSVPDMTNIVLLLVIIMLVFSVIGITLFREVMPHH
FGDLSTAMFSLFICVTQDGWMEIFEAFQQHGDLHYYGGGLFLVLFISIGA
FIFANLVVAVVVTNLECAVKDVREEEQMQAKQLALKGGDLGDKVNNIPVD
LVNDDQIPNRVFQEQAPLVIPNLTGVDIRNIEHYCLVLEAMERNLHAYQQ
LKSDLVKYHDEICILNKSAIAEGVIKYDDDLARKNTIAKESALLAYQKVA
SGGDIVSNLMNMENASLINSKSKTALHDLVTESANIRTRLGSMAGRNATG
RRRSSVRALRNTTEAVKNVNRRASLGF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043971XLOC_043971Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070677TCONS_00070677Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028325VG_K_chnl
IPR005821Ion_trans_dom
Vocabulary: Biological Process
TermDefinition
GO:0006813potassium ion transport
GO:0055085transmembrane transport
GO:0006811ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0005249voltage-gated potassium channel activity
GO:0005216ion channel activity
Vocabulary: Cellular Component
TermDefinition
GO:0008076voltage-gated potassium channel complex
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006811 ion transport
biological_process GO:0006813 potassium ion transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016020 membrane
cellular_component GO:0008076 voltage-gated potassium channel complex
molecular_function GO:0005216 ion channel activity
molecular_function GO:0005249 voltage-gated potassium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028325Voltage-gated potassium channelPRINTSPR00169KCHANNELcoord: 241..267
score: 29.21
coord: 339..365
score: 21.53
coord: 138..166
score: 17.35
coord: 204..224
score: 24.69
NoneNo IPR availableGENE3D1.10.287.70coord: 143..369
e-value: 3.3E-41
score: 140.6
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 144..366
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 145..366
e-value: 1.3E-38
score: 132.6

Blast
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BLAST of TCONS_00070677-protein vs. Swiss-Prot (Human)
Match: CTSR4 (Cation channel sperm-associated protein 4 OS=Homo sapiens GN=CATSPER4 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.425e-58
Identity = 115/331 (34.74%), Postives = 198/331 (59.82%), Query Frame = 0 
Query:  128 EVAEFVSKELVGKVVESRCFRFTILFLIIVNSLLIMLETDRTLEREWGRAFKIMDEIIMSVFICEILLKWYHGFFKFFTQGWNILDFLIVLSLIVGPMIMGGSGGQNVLRILRVLRAFRSLRSISSLPGLQVVVQTILQSVPDMTNIVLLLVIIMLVFSVIGITLFREVMPHHFGDLSTAMFSLFICVTQDGWMEIFEAFQQHGDLHYY--GGGLFLVLFISIGAFIFANLVVAVVVTNLECAVKDVREEEQMQAKQLALKGGDLGDKVNNIP-VDLVNDDQIPNRVFQEQAPLVIPNLTGVDIRNIEHYCLVLEAMERNLHAYQQLKSDL 455
            ++ EF++   + +++    F+  +  L+++N++ I L T+  L+++    F  +D+I++++ +CE+LL W +GF+ F+  GWNIL+F+IV  L++   I       N+  I   LRA R +    ++  L  +++ ILQSVPDM NI++L++  MLVFSV G+TLF   +P HF ++  A+++LFIC+TQDGW++I+  FQ     +    GG ++  +FI+IGAFI  NL V VV TNLE  +K   E+ Q Q    +  G +  ++ + +P V  V      + + QE  PL    L+ +     +++CLVLEA++ NL  Y++++ +L
Sbjct:   75 DMQEFITHMYIKQLLRHPAFQLLLALLLVINAITIALRTNSYLDQKHYELFSTIDDIVLTILLCEVLLGWLNGFWIFWKDGWNILNFIIVFILLLRFFI----NEINIPSINYTLRALRLVHVCMAVEPLARIIRVILQSVPDMANIMVLILFFMLVFSVFGVTLFGAFVPKHFQNIQVALYTLFICITQDGWVDIYSDFQTEKREYAMEIGGAIYFTIFITIGAFIGINLFVIVVTTNLEQMMK-AGEQGQQQRITFSETGAEEEEENDQLPLVHCVVARSEKSGLLQE--PLAGGPLSNLSENTCDNFCLVLEAIQENLRQYKEIRDEL 398
The following BLAST results are available for this feature:
BLAST of TCONS_00070677-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTSR41.425e-5834.74Cation channel sperm-associated protein 4 OS=Homo ... [more]
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