TCONS_00070713-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070713-protein
Unique NameTCONS_00070713-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length131

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070713-protein ID=TCONS_00070713-protein|Name=TCONS_00070713-protein|organism=Clytia hemisphaerica|type=polypeptide|length=131bp
MDEIKIEIKEEVGEWFEVENIIESENLLEAEPHMIDQEPFLVESSEQHLM
FSGSEQSSYEPNPFKIPGNIQPSFVSSPSMDTFQCKECGKSFSQKAYLKK
HLNLHEKLNSYKCNXQATTLLITICTNSFVV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043989XLOC_043989Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070713TCONS_00070713Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 83..105
e-value: 2.8E-4
score: 30.2
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 85..105
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 83..110
score: 13.256
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 80..115
NoneNo IPR availableGENE3D2.20.28.30coord: 95..130
e-value: 1.6E-9
score: 37.5
NoneNo IPR availableGENE3D3.30.160.60coord: 63..94
e-value: 2.9E-9
score: 36.4
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 83..105
e-value: 5.7E-7
score: 29.5

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070713-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top