TCONS_00070723-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070723-protein
Unique NameTCONS_00070723-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length340

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070723-protein ID=TCONS_00070723-protein|Name=TCONS_00070723-protein|organism=Clytia hemisphaerica|type=polypeptide|length=340bp
MTDAFGSVFSFTPNEKVHGRIFNSSDDNVCGDPFSNSKIHGQAFHSIDNK
QEKRIPNDLMKYSSPPQRYSNGGVLPNEKAHGRIFLSDDENVCGDPFSHG
KIHGQTNNSLSSNKRPIRDTNHQPKGLSHKKFNIEKIADTLSHSKINSKN
SFTNHTVIKKEEPDYDSKEGLILDRNHFESPSNGSYITVVPVENPTQINN
FSIRFPPNTSHNAGSSSQDETNDMMPSVTYHSLDSSQKKAILRGALESLP
LTCHVCGEGFERTCHFETHMKTMHSNIKAFNCKDCEVGFARKGDFQKHIV
SVHKTEDKKIYECQVCGKKFWKRCYRDKHKHSMHPMSQYL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043999XLOC_043999Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070723TCONS_00070723Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 311..334
e-value: 7.0
score: 14.7
coord: 251..274
e-value: 0.19
score: 20.8
coord: 280..303
e-value: 0.031
score: 23.4
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 282..303
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 313..334
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 253..274
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 311..339
score: 9.66
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 280..308
score: 10.242
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 251..279
score: 10.866
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 260..320
NoneNo IPR availableGENE3D3.30.160.60coord: 262..291
e-value: 3.7E-10
score: 39.3
NoneNo IPR availableGENE3D3.30.160.60coord: 292..334
e-value: 1.3E-7
score: 31.3
coord: 90..261
e-value: 0.022
score: 14.6
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 252..274
e-value: 0.0076
score: 16.6
coord: 280..303
e-value: 0.0051
score: 17.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..126

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070723-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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