TCONS_00070731-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070731-protein
Unique NameTCONS_00070731-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length215

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070731-protein ID=TCONS_00070731-protein|Name=TCONS_00070731-protein|organism=Clytia hemisphaerica|type=polypeptide|length=215bp
KQSIKIELEQDDPNLDFQHELNFNLRNDFKVEDEGLSGVKHQILNSNDLG
EGVNKNESIGGSSSLADDLLDRKYSTECGKAFSQDDPGSFRSSYNEVINE
HGWNIDNKTKEFSKKQKPMKLYNGSKPKVQCDDCGKLLHKGSLKRHEAIH
RGIKEFECNECGKCFFQKVNMLKHQRFVHRGIKPYECKECGKEFSRTADR
RKHENNVHKVLEVQV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044007XLOC_044007Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070731TCONS_00070731Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 185..208
e-value: 0.024
score: 23.8
coord: 156..179
e-value: 0.007
score: 25.6
coord: 129..150
e-value: 14.0
score: 12.1
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 158..179
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 187..208
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 185..208
score: 11.759
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 156..184
score: 15.438
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 139..194
NoneNo IPR availableGENE3D2.20.28.30coord: 142..164
e-value: 3.7E-12
score: 45.9
NoneNo IPR availableGENE3D3.30.160.60coord: 76..89
e-value: 0.41
score: 10.1
NoneNo IPR availableGENE3D3.30.160.60coord: 125..141
e-value: 0.066
score: 12.9
NoneNo IPR availableGENE3D3.30.300.90coord: 184..215
e-value: 1.0E-7
score: 31.3
NoneNo IPR availableGENE3D2.20.28.10coord: 90..124
e-value: 0.32
score: 10.4
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 156..179
e-value: 7.9E-4
score: 19.6
coord: 185..208
e-value: 0.0014
score: 18.9
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 165..183
e-value: 1.2E-11
score: 43.9

Blast
[Close]
BLAST of TCONS_00070731-protein vs. Swiss-Prot (Human)
Match: ZNF23 (Zinc finger protein 23 OS=Homo sapiens GN=ZNF23 PE=1 SV=3)

HSP 1 Score: 93.9745 bits (232), Expect = 3.126e-22
Identity = 57/133 (42.86%), Postives = 76/133 (57.14%), Query Frame = 0 
Query:   76 TECGKAFSQDDPGSFRSSYNEVINEHGWNIDNKTKEF---SKKQKPMKLYNGSKPKVQCDDCGKLLH-KGSLKRHEAIHRGIKEFECNECGKCFFQKVNMLKHQRFVHRGIKPYECKECGKEFSRTADRRKHE 204
            TECGKAFS    G           E  +  +   K F   S+ ++ ++++ G KP  +C++CGK     G L RH+ IH G K FECNECG+CF  K N+L H R +H G KPY+CKECGK FS  A   +H+
Sbjct:  395 TECGKAFSVK--GKLIQHQRIHTGEKPYECNECGKAFRCNSQFRQHLRIHTGEKP-YECNECGKAFSVNGKLMRHQRIHTGEKPFECNECGRCFTSKRNLLDHHR-IHTGEKPYQCKECGKAFSINAKLTRHQ 523
The following BLAST results are available for this feature:
BLAST of TCONS_00070731-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZNF233.126e-2242.86Zinc finger protein 23 OS=Homo sapiens GN=ZNF23 PE... [more]
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