TCONS_00070825-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070825-protein
Unique NameTCONS_00070825-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length957

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070825-protein ID=TCONS_00070825-protein|Name=TCONS_00070825-protein|organism=Clytia hemisphaerica|type=polypeptide|length=957bp
MVKGGRKIRPDQIEPYTLTPPSCNGKGPPMFASPTKNNEMIHFECTTEEM
KRQFEPPCTKSSAEKQQKCGKLGKPIQIQANHFPLDIKIPNGDIYHYDVT
FILPNKAEVKKSHKSLLIKVIEKVKEQYQSTLGNPNSIVFDGLKNLYSNR
ELFQGLFEGTVKINDGKDSPRFIEVGVRLKRVGNSLPVNYMVSQYLQSGR
KGAAIHDSLQVLNIILGMTPLLHYECVGRTHFNPCTGNGSILEIGHGKSI
WVGTFQSARIGWKPFLNIAVANRPAYNQQPVIQFLMSVLSSKDPRCLSNL
HPKDKTKLDREIKQLKVRFTRPDGQKREYRVNKLVDSAERLSLDIXKTKL
DREIKQLKVRFTRPDGQKREYRVNKLVDSAERLSLDMDSPDGGKRKTTIQ
QYFKNQYKCNLKYPSLPCAHVGPPKGTIYLPIEFLEIKKQLAPTTKKLSE
DETAEMIKQTALQPNIRKQRIQRNLRELKNSFKDDPYAKAFGLEINDKMA
EMRGRVLDAPSIKYKKGSKVSECRHTGGKWNMTSQDRVDPLKFLETVSLG
RWGVLDLAGLPPQQKQAFVDAVAIEAGQRGHHIDYPIYDKADVNNLEDVE
KSFKRLCMHIQQQCNGKPQLVLVIAPFKGNIYPCIKYIGDAVMNVPTQFV
LKKNVLGKPRQGPSGQTIHNLCLKLNAKTGGTNHGLFVRPPVMKKPIIIL
GADVTHSAPSEFKKPSIAAMVGSCNPEASEYFCEVRVQKQGKVMEEIEKT
EEMVKSLLQRFNEKTRVKPLKIIYYRDGVSEGQFISVLNHELTAIRKACL
SLHPDYKPEVTFFVAQKRHNTRLFPSDPKDGFGKARNVPPGTVIDTMITH
PTETDFFLASHEGIQGTTKPTHYHLLWDDSNFSNDELQSLTYNLCHLCSR
CERSVSYPAPTYYAHLAAARAREHHNALLLRNRNRIDFIPKEDLRKIEKC
TLLNYFM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044061XLOC_044061Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070825TCONS_00070825Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003165Piwi
IPR003100PAZ_dom
IPR032472ArgoL2
IPR014811ArgoL1
IPR032474Argonaute_N
IPR012337RNaseH-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 744..764
NoneNo IPR availableGENE3D2.170.260.10coord: 277..344
e-value: 1.1E-6
score: 28.1
coord: 345..440
e-value: 1.2E-21
score: 76.6
NoneNo IPR availableGENE3D3.40.50.2300coord: 506..687
e-value: 1.1E-30
score: 106.1
NoneNo IPR availableCDDcd04657Piwi_ago-likecoord: 486..924
e-value: 1.28614E-167
score: 498.291
NoneNo IPR availableCDDcd02846PAZ_argonaute_likecoord: 349..437
e-value: 1.19964E-17
score: 79.6686
IPR003165Piwi domainSMARTSM00950Piwi_a_2coord: 620..926
e-value: 2.9E-99
score: 345.7
IPR003165Piwi domainPFAMPF02171Piwicoord: 620..924
e-value: 4.0E-90
score: 302.0
IPR003165Piwi domainPROSITEPS50822PIWIcoord: 619..926
score: 43.275
IPR003100PAZ domainPFAMPF02170PAZcoord: 346..444
e-value: 1.8E-10
score: 40.6
IPR003100PAZ domainPROSITEPS50821PAZcoord: 352..439
score: 11.989
IPR003100PAZ domainSUPERFAMILY101690PAZ domaincoord: 386..483
coord: 76..157
coord: 197..338
IPR003100PAZ domainSUPERFAMILY101690PAZ domaincoord: 344..478
IPR032472Argonaute linker 2 domainPFAMPF16488ArgoL2coord: 467..514
e-value: 2.1E-10
score: 40.7
IPR014811Argonaute, linker 1 domainPFAMPF08699ArgoL1coord: 227..274
e-value: 6.9E-5
score: 22.3
IPR032474Protein argonaute, N-terminalPFAMPF16486ArgoNcoord: 74..216
e-value: 9.6E-18
score: 65.1
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 691..938
e-value: 7.6E-94
score: 313.2
IPR012337Ribonuclease H-like domainSUPERFAMILY53098Ribonuclease H-likecoord: 609..925

Blast
[Close]
BLAST of TCONS_00070825-protein vs. Swiss-Prot (Human)
Match: AGO2 (Protein argonaute-2 OS=Homo sapiens GN=AGO2 PE=1 SV=3)

HSP 1 Score: 506.138 bits (1302), Expect = 1.373e-165
Identity = 323/864 (37.38%), Postives = 458/864 (53.01%), Query Frame = 0 
Query:   70 GKLGKPIQIQANHFPLDIKIPNGDIYHYDVTFILPNKAEVKKSHKSLLIKVIEKVKEQYQSTLGNPNSIVFDGLKNLYSNRELFQGLFEGTVKIN---DGKDSPRFIEVGVRLKRVGNSLPVNYMVSQYLQSGRKGAAIHDSLQVLNIILGMTPLLHYECVGRTHFNPCTGNGSILEIGHGKSIWVGTFQSARIG-WKPFLNIAVANRPAYNQQPVIQFLMSVLSSKDPRCLSNLHPKDKTKLDREIKQLKVRFTRPDGQKREYRVNKLVDSAERLSLDIXKTKLDREIKQLKVRFTRPDGQKREYRV-NKLVDSAERLSLDMDSPDGGKRKTTIQQYFKNQYKCNLKYPSLPCAHVGPPKGTIYLPIEFLEIKKQLAPTTKKLSEDETAEMIKQTALQPNIRKQRIQRNLRELKNSFKDDPYAKAFGLEINDKMAEMRGRVLDAPSIKYKKGSKVSECRHTGGKWNMTSQDRVDPLKFLETVSLGRWGVLDLAGLPPQQKQAFVDAVAIEAGQRGHHID--YPIYDKADVNNLEDVEKSFKRLCMHIQQQCNGKPQLVLVIAPFKGNIYPCIKYIGDAVMNVPTQFVLKKNVLGKPRQGPSGQTIHNLCLKLNAKTGGTNHGLFV--RPPVMKKPIIILGADVTHSAPSEFKKPSIAAMVGSCNPEASEYFCEVRVQKQGKVMEEIEKTEEMVKSLLQRFNEKTRVKPLKIIYYRDGVSEGQFISVLNHELTAIRKACLSLHPDYKPEVTFFVAQKRHNTRLFPSDPKDGFGKARNVPPGTVIDTMITHPTETDFFLASHEGIQGTTKPTHYHLLWDDSNFSNDELQSLTYNLCHLCSRCERSVSYPAPTYYAHLAAARAREH 924
            G  G+ I++QAN F +DI  P  DIYHY++  I P K   + + +     ++E + + +++ +      VFDG KNLY+   L  G  +  +++    +GKD  R  +V ++         V+        SGR  +   +++Q L++++   P + Y  VGR+ F    G  + L  G G+ +W G  QS R   WK  LNI V+    Y  QPVI+F+  VL  K                                          ++  ++   D  + K  +EIK LKV  T     KR+YRV N     A   +  +    G   + T+ QYFK+++K  L+YP LPC  VG  +   YLP+E   I        KKL++++T+ MI+ TA     R++ I + +R    SF  DPY + FG+ + D+M ++ GRVL  PSI Y  G   +      G W+M ++      +F   + +  W +   A   PQ++   V   +     R    D   PI  +           S + +  H++    G  QLV+VI P K  +Y  +K +GD V+ + TQ V  KNV     Q  + QT+ NLCLK+N K GG N+ L    RPPV ++P+I LGADVTH    + KKPSIAA+VGS +   + Y   VRVQ+  +  E I+    MV+ LL +F + TR KP +II+YRDGVSEGQF  VL+HEL AIR+AC+ L  DY+P +TF V QKRH+TRLF +D  +  GK+ N+P GT +DT ITHPTE DF+L SH GIQGT++P+HYH+LWDD+ FS+DELQ LTY LCH   RC RSVS PAP YYAHL A RAR H
Sbjct:   32 GTSGRTIKLQANFFEMDI--PKIDIYHYELD-IKPEKCPRRVNRE-----IVEHMVQHFKTQIFGDRKPVFDGRKNLYTAMPLPIGRDKVELEVTLPGEGKD--RIFKVSIKWVSC-----VSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSNPL--GGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKS-----------------------------------------IEEQQKPLTDSQRVKFTKEIKGLKVEITHCGQMKRKYRVCNVTRRPASHQTFPLQQESGQTVECTVAQYFKDRHKLVLRYPHLPCLQVGQEQKHTYLPLEVCNIVAG-QRCIKKLTDNQTSTMIRATARSAPDRQEEISKLMRS--ASFNTDPYVREFGIMVKDEMTDVTGRVLQPPSILYG-GRNKAIATPVQGVWDMRNK------QFHTGIEIKVWAI---ACFAPQRQCTEVHLKSFTEQLRKISRDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYAGL-QLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNV-----QRTTPQTLSNLCLKINVKLGGVNNILLPQGRPPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPNRYCATVRVQQHRQ--EIIQDLAAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDKNERVGKSGNIPAGTTVDTKITHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYH 816
The following BLAST results are available for this feature:
BLAST of TCONS_00070825-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AGO21.373e-16537.38Protein argonaute-2 OS=Homo sapiens GN=AGO2 PE=1 S... [more]
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