TCONS_00071134-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071134-protein
Unique NameTCONS_00071134-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length192

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071134-protein ID=TCONS_00071134-protein|Name=TCONS_00071134-protein|organism=Clytia hemisphaerica|type=polypeptide|length=192bp
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDG
KQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWT
PEVKHFCPNVPIILVGNKKDLRNDNNTIHELSKMKQEPVKIEDGKAMAEK
ISAFSYLECSAKTKDGVREVFETATRAALQVRKKKKGKCALL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044216XLOC_044216Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071134TCONS_00071134Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR003578Small_GTPase_Rho
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007264 small GTPase mediated signal transduction
cellular_component GO:0005622 intracellular
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 46..68
score: 49.72
coord: 6..27
score: 47.14
coord: 29..45
score: 28.5
coord: 108..121
score: 59.9
coord: 156..178
score: 37.58
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 8..181
e-value: 3.3E-128
score: 441.9
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 11..191
e-value: 0.0059
score: -5.9
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 7..181
e-value: 1.3E-24
score: 97.7
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 7..181
e-value: 9.8E-21
score: 84.9
NoneNo IPR availableGENE3D3.40.50.300coord: 77..182
e-value: 2.1E-31
score: 107.5
NoneNo IPR availableGENE3D3.30.70.1390coord: 5..75
e-value: 5.9E-22
score: 77.0
NoneNo IPR availableCDDcd01870RhoA_likecoord: 5..179
e-value: 5.6933E-137
score: 382.161
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 7..179
e-value: 9.6E-59
score: 197.5
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 5..159
e-value: 3.5E-45
score: 151.7
IPR003578Small GTPase superfamily, Rho typePROSITEPS51420RHOcoord: 1..178
score: 28.087
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..179

Blast
[Close]
BLAST of TCONS_00071134-protein vs. Swiss-Prot (Human)
Match: RHOA (Transforming protein RhoA OS=Homo sapiens GN=RHOA PE=1 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 5.328e-126
Identity = 171/193 (88.60%), Postives = 179/193 (92.75%), Query Frame = 0 
Query:    1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDNNTIHELSKMKQEPVKIEDGKAMAEKISAFSYLECSAKTKDGVREVFETATRAALQVRK-KKKGKCALL 192
            MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND +T  EL+KMKQEPVK E+G+ MA +I AF Y+ECSAKTKDGVREVFE ATRAALQ R+ KKK  C +L
Sbjct:    1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRGKKKSGCLVL 193
The following BLAST results are available for this feature:
BLAST of TCONS_00071134-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RHOA5.328e-12688.60Transforming protein RhoA OS=Homo sapiens GN=RHOA ... [more]
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