TCONS_00071235-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071235-protein
Unique NameTCONS_00071235-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length508

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071235-protein ID=TCONS_00071235-protein|Name=TCONS_00071235-protein|organism=Clytia hemisphaerica|type=polypeptide|length=508bp
MSSISYNEICENAKLARENALLGQYDSALVYYQGLLQQIQKVLLQAKDPS
RKQKWQVARQEIAQEYEYVKDINRTLADFKRDQFNAPQPNPAPVVKRDYS
EPPTRETRDPDVWPPPTPVERPSKPVSRPVVRNIRNDRNDEKSNRQARGK
PAPKRNVKSSDGRSGASNKPAENKAPIKAKVDTGRKPKEEKSENEEPRFD
GSGYDKDLVEGLERDIVQKNPNVRWNDIAELDEAKKLLNEAVVLPLLLPG
FFTGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVTSSTLTSKYR
GESEKLVRLLFEMARFYAPSTIFIDEIDSICSKRGTDNEHEASRRVKSEL
LIQMDGVSGNTAETDAQKVVMVLAATNFPWDIDEALRRRLEKRIYIPLPT
AVGREELLKINLREVKCEDDVNLNELANMMDGYSGSDITNVCRDASMMVM
RRCIQGLSAEEIKNLPKEKLELPVNQSDFKHALKKVSKSVSEEDIKKYEE
WMKEFGSV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044280XLOC_044280Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071235TCONS_00071235Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR015415Vps4_C
IPR003959ATPase_AAA_core
IPR003960ATPase_AAA_CS
IPR028596KATNA1
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0008017microtubule binding
GO:0008568microtubule-severing ATPase activity
Vocabulary: Biological Process
TermDefinition
GO:0051013microtubule severing
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051013 microtubule severing
molecular_function GO:0005524 ATP binding
molecular_function GO:0008017 microtubule binding
molecular_function GO:0008568 microtubule-severing ATPase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 258..400
e-value: 1.4E-19
score: 81.1
IPR015415Vps4 oligomerisation, C-terminalPFAMPF09336Vps4_Ccoord: 463..506
e-value: 1.8E-11
score: 43.7
NoneNo IPR availableGENE3D3.40.50.300coord: 213..405
e-value: 3.2E-50
score: 169.8
NoneNo IPR availableGENE3D1.10.8.60coord: 406..508
e-value: 4.3E-29
score: 100.0
NoneNo IPR availableGENE3D1.20.58.280coord: 5..79
e-value: 0.0078
score: 15.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..205
NoneNo IPR availableCDDcd00009AAAcoord: 256..398
e-value: 2.36363E-26
score: 103.38
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 262..398
e-value: 4.1E-40
score: 137.2
IPR003960ATPase, AAA-type, conserved sitePROSITEPS00674AAAcoord: 370..389
IPR028596Katanin p60 subunit A1HAMAPMF_03023Katanin_p60_A1coord: 7..508
score: 39.92
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 221..505

Blast
[Close]
BLAST of TCONS_00071235-protein vs. Swiss-Prot (Human)
Match: KATL1 (Katanin p60 ATPase-containing subunit A-like 1 OS=Homo sapiens GN=KATNAL1 PE=1 SV=1)

HSP 1 Score: 590.882 bits (1522), Expect = 0.000e+0
Identity = 319/506 (63.04%), Postives = 382/506 (75.49%), Query Frame = 0 
Query:    4 ISYNEICENAKLARENALLGQYDSALVYYQGLLQQIQKVLLQAKDPSRKQKWQVARQEIAQEYEYVKDINRTLADFKRDQFNAPQPNPAPVVKRDYSEPPTRETRDPDVWPPPTPVERPSKPVSRPVVRNIRNDRNDEKSNRQARGKPAPKRNVKSSDGRSGASNKPAENKAPIKAKVDTGRKPKEE-KSENEEPRFDGSGYDKDLVEGLERDIVQKNPNVRWNDIAELDEAKKLLNEAVVLPLLLPGFFTGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVTSSTLTSKYRGESEKLVRLLFEMARFYAPSTIFIDEIDSICSKRGTDNEHEASRRVKSELLIQMDGVSGNTAETDAQKVVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAVGREELLKINLREVKCEDDVNLNELANMMDGYSGSDITNVCRDASMMVMRRCIQGLSAEEIKNLPKEKLELPVNQSDFKHALKKVSKSVSEEDIKKYEEWMKEFGSV 508
            ++  EIC+NAK  RE ALLG YDS++VYYQG++QQIQ+     +DP+ K KWQ  RQE+ +EYE VK I  TL  FK D+     P   PV  +D  EP     RDP VWPPP P E  + P  R   R +R  R  E +   ARG       +  S+  S + +K  + +A  + + D GRK  ++  S+ E P+FDG+GYDKDLVE LERDIV +NP++ W+DIA+L+EAKKLL EAVVLP+ +P FF GIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNV+SSTLTSKYRGESEKLVRLLFEMARFYAP+TIFIDEIDSICS+RGT +EHEASRRVKSELLIQMDGV G     D  K+VMVLAATNFPWDIDEALRRRLEKRIYIPLPTA GR ELLKINLREV+ + D+ L ++A  ++GYSG+DITNVCRDAS+M MRR I GLS EEI+ L KE+L++PV + DF+ ALKK++KSVS  D++KYE+WM EFGS 
Sbjct:    1 MNLAEICDNAKKGREYALLGNYDSSMVYYQGVMQQIQRHCQSVRDPAIKGKWQQVRQELLEEYEQVKSIVSTLESFKIDK-----PPDFPVSCQD--EP----FRDPAVWPPPVPAEHRAPPQIRRPNREVRPLRK-EMAGVGARGPVGRAHPISKSEKPSTSRDK--DYRA--RGRDDKGRKNMQDGASDGEMPKFDGAGYDKDLVEALERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLSPEEIRALSKEELQMPVTKGDFELALKKIAKSVSAADLEKYEKWMVEFGSA 490
The following BLAST results are available for this feature:
BLAST of TCONS_00071235-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KATL10.000e+063.04Katanin p60 ATPase-containing subunit A-like 1 OS=... [more]
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