TCONS_00071243-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071243-protein
Unique NameTCONS_00071243-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length198

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071243-protein ID=TCONS_00071243-protein|Name=TCONS_00071243-protein|organism=Clytia hemisphaerica|type=polypeptide|length=198bp
MEEHLRVCFYRQVECEYCNKECSFTQLKEHYNNCEGYPIPCNNLGCPDNI
QRSLMENHLENCEFAIVSCPFLAFGCTEKIQRRDIEDHNGKAKSSHDTLL
FQMVNKMKHENIERDQKIQQQDQRIEELENIVTKNEEEIKELQNNSMQQK
ASITKDLLALADKNQSIEDSLIKTNSMTSNIVDWANKGGDGSAERSVI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044283XLOC_044283Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071243TCONS_00071243Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001293Znf_TRAF
IPR008974TRAF-like
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 111..152
NoneNo IPR availableGENE3D1.20.5.50coord: 115..154
e-value: 0.0011
score: 18.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 13..40
e-value: 0.0019
score: 17.9
coord: 41..88
e-value: 5.0E-16
score: 58.1
IPR001293Zinc finger, TRAF-typePFAMPF02176zf-TRAFcoord: 30..88
e-value: 1.8E-14
score: 54.0
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 30..86
score: 12.277
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 39..96

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071243-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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