TCONS_00071252-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071252-protein
Unique NameTCONS_00071252-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length383

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071252-protein ID=TCONS_00071252-protein|Name=TCONS_00071252-protein|organism=Clytia hemisphaerica|type=polypeptide|length=383bp
MSWYEGIYDKCKYVQQEFKRCFGYWSDQVNGNNEAADHQNESKVAVEKNK
TVEDEKVPASKTHVKVLLKDDLITNQSIDVIDDQITTSEQNLVWMVWKQL
MAGGLGGLVSRTTTAPLDRIKILLQASAGIGKERIPIYGVLKCTIKEGGL
RSLWRGNFINCMKVGPESAIRLLTFEQMKLLIGQGESDLEMYQRFVAGSI
AGIIAQTSIYPMEVIRTRMAVAKTGVYKNFYDCTKKLKREIGWRGFYKGI
IPSLIGIVPNAGIDLCIYETMKQNWLNSFAVKPQRPSFTSTLLAGGMSSL
CSMAVCYPFALIRTNLQAETIKPELKGSNEFITMSNSFRDIVKTHGIRGL
YRGIVPNMLKVVPACSISYMVYEQARDQLGLHS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044289XLOC_044289Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071252TCONS_00071252Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002067Mit_carrier
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002067Mitochondrial carrier proteinPRINTSPR00926MITOCARRIERcoord: 247..265
score: 34.86
coord: 295..317
score: 22.45
coord: 156..176
score: 25.92
coord: 112..126
score: 53.11
coord: 99..112
score: 39.11
coord: 204..222
score: 31.49
IPR023395Mitochondrial carrier domainGENE3D1.50.40.10coord: 91..379
e-value: 2.8E-79
score: 265.4
IPR023395Mitochondrial carrier domainSUPERFAMILY103506Mitochondrial carriercoord: 96..374
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 188..276
e-value: 8.9E-23
score: 79.9
coord: 286..379
e-value: 1.0E-19
score: 70.1
coord: 96..183
e-value: 5.5E-20
score: 71.0
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 98..181
score: 16.292
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 286..378
score: 21.376
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 189..274
score: 24.229

Blast
[Close]
BLAST of TCONS_00071252-protein vs. Swiss-Prot (Human)
Match: SCMC2 (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Homo sapiens GN=SLC25A25 PE=1 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 9.029e-96
Identity = 145/303 (47.85%), Postives = 199/303 (65.68%), Query Frame = 0 
Query:   81 IDDQITTSEQNLVWMVWKQLMAGGLGGLVSRTTTAPLDRIKILLQASAGIGKERIPIYGVLKCTIKEGGLRSLWRGNFINCMKVGPESAIRLLTFEQMKLLIGQGESDLEMYQRFVAGSIAGIIAQTSIYPMEVIRTRMAVAKTGVYKNFYDCTKKLKREIGWRGFYKGIIPSLIGIVPNAGIDLCIYETMKQNWLNSFAVKPQRPSFTSTLLAGGMSSLCSMAVCYPFALIRTNLQAETIKPELKGSNEFITMSNSFRDIVKTHGIRGLYRGIVPNMLKVVPACSISYMVYEQARDQLGLHS 383
            + D+ T  E+    M W+ L+AGG  G VSRT TAPLDR+K+L+Q  A      + I G     I+EGG RSLWRGN IN +K+ PESAI+ + +EQ+K L+G  +  L +++R VAGS+AG IAQ+SIYPMEV++TRMA+ KTG Y    DC +++    G   FYKG +P+++GI+P AGIDL +YET+K  WL  +AV    P     L  G MSS C     YP AL+RT +QA+     ++G+ E +TMS+ F+ I++T G  GLYRG+ PN +KV+PA SISY+VYE  +  LG+ S
Sbjct:  172 VPDEFTVEERQ-TGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHAS-RSNNMGIVGGFTQMIREGGARSLWRGNGINVLKIAPESAIKFMAYEQIKRLVGSDQETLRIHERLVAGSLAGAIAQSSIYPMEVLKTRMALRKTGQYSGMLDCARRILAREGVAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQHYAVNSADPGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQA---SIEGAPE-VTMSSLFKHILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKITLGVQS 468
The following BLAST results are available for this feature:
BLAST of TCONS_00071252-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SCMC29.029e-9647.85Calcium-binding mitochondrial carrier protein SCaM... [more]
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