TCONS_00071278-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071278-protein
Unique NameTCONS_00071278-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length799

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071278-protein ID=TCONS_00071278-protein|Name=TCONS_00071278-protein|organism=Clytia hemisphaerica|type=polypeptide|length=799bp
MLSTKIRSILNVSGKYSSRVATSYFANQRYVMHDVTAEKVPENLRSQWPK
ASFNIKKMQELLDHDNHQMREDLRKFLSDPVFKPKYNISLEEEREVALQR
LKLICDAGYISVLDFKNNPLKIFAAHELASIIDPAMATKMTVQFNLFGGT
VLKLGTERHHSKLLSGIDDLNDVGCFGLTELGYGNNAVEMETTAIYDEKT
DELIVNTTTPLAQKYWITNGAVHAKHCVVFAQLMVKGENHGIHGVLVPIR
DQGLNTMPGVLVEDMGYKIGLNGVDNAKLTFNDVRVPRENLLNKYSDIDD
NGNFITSIKSPRARFLTVADQLLSGRICIASMAQGAAKTALAIALRYSAT
RLTVGESGKSDTPILSYQLQQNALMPLLAETYCLNIALDYVKDRWANQAE
DGSEHQEVVTMCCVMKPFCGWNLENLASISRERTGGQGYLSCNRLGVFIN
LSHACITAEGDNSVLMQKVAKERLSLFKPSTGEAPVNKDLSSTEYLNYLL
QKREDVLFTNLGKRMMKAGKEKLYDTWMLKCSDLVQLAARSFGERLVNDR
VLVAINTADPTLKEILSELHTLYVVSVVKRNLAWYLTNGILTIEQGKEIE
DLSDELCRNIAPKSLDLCEAFGLTDSMIXPSTGEAPVNKDLSSTEYLNYL
LQKREDVLFTNLGKRMMKAGKEKLYDTWMLKCSDLVQLAARSFGERLVND
RVLVAINTADPTLKEILSELHTLYVVSVVKRNLAWYLTNGILTIEQGKEI
EDLSDELCRNIAPKSLDLCEAFGLTDSMISAPIALDWIKYNEYDNQGEL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044299XLOC_044299Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071278TCONS_00071278Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013786AcylCoA_DH/ox_N
IPR009075AcylCo_DH/oxidase_C
IPR002655Acyl-CoA_oxidase_C
IPR006091Acyl-CoA_Oxase/DH_cen-dom
IPR012258Acyl-CoA_oxidase
IPR009100AcylCoA_DH/oxidase_NM_dom
Vocabulary: Molecular Function
TermDefinition
GO:0050660flavin adenine dinucleotide binding
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
GO:0003997acyl-CoA oxidase activity
GO:0071949FAD binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006635fatty acid beta-oxidation
GO:0006631fatty acid metabolic process
GO:0008152metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005777peroxisome
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0006631 fatty acid metabolic process
biological_process GO:0008152 metabolic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005777 peroxisome
molecular_function GO:0003997 acyl-CoA oxidase activity
molecular_function GO:0071949 FAD binding
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013786Acyl-CoA dehydrogenase/oxidase, N-terminalGENE3D1.10.540.10coord: 54..171
e-value: 4.9E-23
score: 81.2
NoneNo IPR availableGENE3D1.20.140.10coord: 645..773
e-value: 7.6E-20
score: 70.7
coord: 494..622
e-value: 7.6E-20
score: 70.7
NoneNo IPR availableGENE3D2.40.110.10coord: 174..285
e-value: 3.1E-25
score: 87.8
NoneNo IPR availableGENE3D1.20.140.10coord: 286..486
e-value: 6.4E-38
score: 129.6
IPR009075Acyl-CoA dehydrogenase/oxidase C-terminalPFAMPF00441Acyl-CoA_dh_1coord: 318..471
e-value: 2.5E-4
score: 21.2
IPR009075Acyl-CoA dehydrogenase/oxidase C-terminalSUPERFAMILY47203Acyl-CoA dehydrogenase C-terminal domain-likecoord: 314..480
IPR009075Acyl-CoA dehydrogenase/oxidase C-terminalSUPERFAMILY47203Acyl-CoA dehydrogenase C-terminal domain-likecoord: 640..785
IPR009075Acyl-CoA dehydrogenase/oxidase C-terminalSUPERFAMILY47203Acyl-CoA dehydrogenase C-terminal domain-likecoord: 489..629
IPR002655Acyl-CoA oxidase, C-terminalPFAMPF01756ACOXcoord: 513..628
e-value: 4.5E-12
score: 45.8
coord: 664..784
e-value: 3.7E-13
score: 49.4
IPR006091Acyl-CoA oxidase/dehydrogenase, central domainPFAMPF02770Acyl-CoA_dh_Mcoord: 175..284
e-value: 2.0E-16
score: 59.9
IPR012258Acyl-CoA oxidasePIRSFPIRSF000168Acyl-CoA_oxidasecoord: 633..798
e-value: 9.4E-12
score: 42.0
coord: 31..656
e-value: 8.0E-126
score: 419.0
IPR009100Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domainSUPERFAMILY56645Acyl-CoA dehydrogenase NM domain-likecoord: 57..296

Blast
[Close]
BLAST of TCONS_00071278-protein vs. Swiss-Prot (Human)
Match: ACOX3 (Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapiens GN=ACOX3 PE=1 SV=2)

HSP 1 Score: 279.256 bits (713), Expect = 5.737e-83
Identity = 200/605 (33.06%), Postives = 301/605 (49.75%), Query Frame = 0 
Query:   79 DPVF--KPKYNISLEEEREVALQRLKLICDAGYISVLDFKNNPLKIFAAHELASIIDPAMATKMTVQFNLFGGTVLKLGTERHHSKLLSGIDDLNDVGCFGLTELGYGNNAVEMETTAIYDEKTDELIVNTTTPLAQKYWITNGAVHAKHCVVFAQLMVKGEN-HGIHGVLVPIRD-QGLNTMPGVLVEDMGYKIGLNGVDNAKLTFNDVRVPRENLLNKYSDIDDNGNFITSIKSPRARFLTVADQLLSGRICIASMAQGAAKTALAIALRYSATRLTVGESGKSDTPILSYQLQQNALMPLLAETYCLN-----IALDYVK--------DRWANQAEDGSEHQEVVTMCCVMKPFCGWNLENLASISRERTGGQGYLSCNRLGVFINLSHACITAEGDNSVLMQKVAKERLSLFKPSTGE-APVNKDLSSTEYLN----YLLQKRE-----DVLFTN-------------LGKRMMKAGKEKLYDTWMLKCSDLVQLA-----ARSFGERLVNDRVLVAIN--TADPTLKEILSELHTLYVVSVVKRNLAWYLTNGILTIEQGKEI-EDLSDELCRNIAPKSLDLCEAFGLTDSMIXPSTGEA 635
            DP+F   P  ++SLE+ RE+   R K I +  ++SV D   +PLK+ A  +   + D ++A K  +   +FG  V   G+ERH +  +  I  +   GCF LTEL +G+N   + TTA YD  T+E I+++    A K+W+ N    A H VVFA+L V G+  HG+H  +V IRD + L  MPGV+V D+G K+G NG+DN    F+ VRVPR++LLN+  D+   G +++  K  R RF      L SGR+ I S+A    K A+AIALR+SATR   G + + + P+L Y +QQ  L+P LA  Y L+     + LD V+        DR A QAE G   +E+  +    KP   W  +      RE  GG GYL+ NRLGV  + +    T EGDN++L+Q+ +   L L      + A     L S ++L+     L QK E     D L +              L +   K  +EK   +   +  +  Q++     A +F E  V  R    ++  +  P+L+ +L  L  LY +  + R+ A     G  + EQ  E+ E     LC  +   ++ L +     D ++    G A
Sbjct:   58 DPLFARSPGADLSLEKYRELNFLRCKRIFEYDFLSVEDMFKSPLKVPALIQCLGMYDSSLAAKYLLHSLVFGSAVYSSGSERHLT-YIQKIFRMEIFGCFALTELSHGSNTKAIRTTAHYDPATEEFIIHSPDFEAAKFWVGNMGKTATHAVVFAKLCVPGDQCHGLHPFIVQIRDPKTLLPMPGVMVGDIGKKLGQNGLDNGFAMFHKVRVPRQSLLNRMGDVTPEGTYVSPFKDVRQRFGASLGSLSSGRVSIVSLAILNLKLAVAIALRFSATRRQFGPTEEEEIPVLEYPMQQWRLLPYLAAVYALDHFSKSLFLDLVELQRGLASGDRSARQAELG---REIHALASASKPLASWTTQQGIQECREACGGHGYLAMNRLGVLRDDNDPNCTYEGDNNILLQQTSNYLLGLLAHQVHDGACFRSPLKSVDFLDAYPGILDQKFEVSSVADCLDSAVALAAYKWLVCYLLRETYQKLNQEKRSGSSDFEARNKCQVSHGRPLALAFVELTVVQRFHEHVHQPSVPPSLRAVLGRLSALYALWSLSRHAALLYRGGYFSGEQAGEVLESAVLALCSQLKDDAVALVDVIAPPDFVLDSPIGRA 658
The following BLAST results are available for this feature:
BLAST of TCONS_00071278-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACOX35.737e-8333.06Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapi... [more]
back to top