TCONS_00071287-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00071287-protein
Unique Name	TCONS_00071287-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	656

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00071287-protein ID=TCONS_00071287-protein|Name=TCONS_00071287-protein|organism=Clytia hemisphaerica|type=polypeptide|length=656bp
MLANMNKMMMEKVKSFQQQLRSRDERIVALETENAMLYLKLAQCQCQLRD
SKQEATYHAEIKREDEKLRYELREKLFAAQDDLTKLRNQFNTTREQIKRL
PLELKNSISFDDVIKQAGGSSIMKNLSTEHTLSTEQLQDKLLQAERARDE
AMRKTNMERLRRRTLHNTLVELRGNIRVHCRVRPLLAALDSNGDGRLLGL
PKTQSEKIVEVMDEETLLFNQLNANNSSSNKAKTFEYERVYKPNDDQTMI
FADVAPLLTSLLDGYNVCIMAYGQTGSGKTHTMVGDHSLYNDLPDNEEEY
KEGIIPRSAKEIIRLMKERGSATESYSLEISVFEVYNNEINDLLARDDAK
TIKHAVFSANDGSQEIPSLVSQPVSSAREVIDYVTYGMRHRHEDSTKVHA
HSSRSHLIVQLNLFQTNMASSATTPLDERSDETSPALSPSVGRSKQIGTS
IPVRSRSPAPRYSRSPVPSRKAHSRSSTPVSRSQELVSPTSSSTNNESQT
KNTTKTITRTIKTKLQLVDLAGSECVGMSGVTGSALRETSNINKSLSALA
DVLQALSENQNHIPYRNTKLTHILQDTIGGDSKLLVMLCVSPVQKYTTET
SQCLAFGSRTRQVARGPAKKRRPTGFNLDIPLWSSTESLHSRSSSSSIPR
ASNPRR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_044304	XLOC_044304	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00071287	TCONS_00071287	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001752	Kinesin_motor_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0003777	microtubule motor activity
GO:0008017	microtubule binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007018	microtubule-based movement

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007018	microtubule-based movement
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0003777	microtubule motor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 134..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 422..505
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 636..656
IPR001752	Kinesin motor domain	PRINTS	PR00380	KINESINHEAVY	coord: 514..532 score: 54.96 coord: 563..584 score: 51.14 coord: 264..285 score: 71.78
IPR001752	Kinesin motor domain	SMART	SM00129	kinesin_4	coord: 173..621 e-value: 1.4E-72 score: 257.1
IPR001752	Kinesin motor domain	GENE3D	3.40.850.10		coord: 167..627 e-value: 5.3E-101 score: 337.3
IPR001752	Kinesin motor domain	PFAM	PF00225	Kinesin	coord: 207..423 e-value: 5.5E-49 score: 166.8 coord: 475..613 e-value: 1.5E-34 score: 119.3
IPR001752	Kinesin motor domain	PROSITE	PS50067	KINESIN_MOTOR_2	coord: 175..613 score: 83.42
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 504..613 coord: 137..416

Blast

[Close]

BLAST of TCONS_00071287-protein vs. Swiss-Prot (Human)
Match: KIF25 (Kinesin-like protein KIF25 OS=Homo sapiens GN=KIF25 PE=2 SV=2)

HSP 1 Score: 303.523 bits (776), Expect = 2.807e-97
Identity = 172/389 (44.22%), Postives = 237/389 (60.93%), Query Frame = 0

Query:  239 RVYKPNDDQTMIFADVAPLLTSLLDGYNVCIMAYGQTGSGKTHTMVGDHSLYNDLPDNEEEYKEGIIPRSAKEIIRLMKERGSATESYSLEISVFEVYNNEINDLLARDD---AKTIKHAVFSANDGSQEIPSLVSQPVSSAREVIDYVTYGMRHRHEDSTKVHAHSSRSHLIVQLNLFQTNMASSATTPLDERSDETSPALSPSVGRSKQIGTSIPVRSRSPAPRYSRSPVPSRKAHSRSSTPVSRSQELVSPTSSSTNNESQTKNTTKTITRTIKTKLQLVDLAGSECVGMSGVTGSALRETSNINKSLSALADVLQALSENQNHIPYRNTKLTHILQDTIGGDSKLLVMLCVSPVQKYTTETSQCLAFGSRTRQVARGPAKKRRPT 624
            RVY P + Q+ +F DV PLLTSLLDGYNVC+MAYGQTGSGK++TM+G HS    +   + +   GIIPR A+E+ RL+ E  + + S  +E+S+ EVYNN+I DLLA+D       +K  V +A DG  E+  L S+ V SA ++++ V  G++ R +  T VHA SSRSHLI+ + L     AS + +  D+    T P                  R ++ A R  RS    R+A          SQ  ++P     N     +         ++ +LQLVD AGSECVG+SGVTG ALRE + I++SL+ALA VL AL E++ H PYRN++LTH+LQD +GGD+KLLV+LC+SP Q++  +T Q L FG R RQV RGPA+K+ P+
Sbjct:   31 RVYGPAESQSAVFGDVCPLLTSLLDGYNVCVMAYGQTGSGKSYTMLGRHSDDGPVLPLDPQSDLGIIPRVAEELFRLILE--NTSRSPKVEVSIVEVYNNDIFDLLAKDSIAAVSGVKREVVTAKDGRTEVALLASEAVGSASKLMELVHGGLQLRAKHPTLVHADSSRSHLIITVTL---TTASCSDSTADQACSATLP------------------REQTEAGRAGRS----RRA----------SQGALAPQLVPGNPAGHAEQ--------VQARLQLVDSAGSECVGVSGVTGLALREMACISRSLAALAGVLGALLEHRGHAPYRNSRLTHLLQDCLGGDAKLLVILCISPSQRHLAQTLQGLGFGIRARQVQRGPARKKPPS 374

The following BLAST results are available for this feature:

BLAST of TCONS_00071287-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00071287-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
KIF25	2.807e-97	44.22	Kinesin-like protein KIF25 OS=Homo sapiens GN=KIF2...	[more]

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TCONS_00071287-protein (polypeptide) - C. hemisphaerica