TCONS_00071320-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071320-protein
Unique NameTCONS_00071320-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length325

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071320-protein ID=TCONS_00071320-protein|Name=TCONS_00071320-protein|organism=Clytia hemisphaerica|type=polypeptide|length=325bp
GQQNSKKQMINKTTRFLSMMKNKVTTPDPSQKSISSFFQKSTKRSSSNMS
SPPAKIAKRNDGKENATTTSPLSPEQKRKMEENRVKAQEKLLEKTTQEFD
IGQSWKKALEPEFSKEYFGKLKNFVAAERKQKTIYPPEKDVFSWTNYFDI
NDTKVVIIGQDPYHGPKQAHGLCFSVQLGITPPPSLKNMYKELASDIEGF
EIPSHGYLAGWASQGVLLLNACLTVVAHNANSHQGKGWEKLTDATIKWID
RNLDGVVFILWGKYAEKKGSFINKSRHLVLTGKHPSPLSAHRGFFGCKHF
SKTNEYLQKQKKKPIDWNYLPEKLD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044323XLOC_044323Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071320TCONS_00071320Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005122Uracil-DNA_glycosylase-like
IPR002043UDG_fam1
IPR018085Ura-DNA_Glyclase_AS
Vocabulary: Molecular Function
TermDefinition
GO:0004844uracil DNA N-glycosylase activity
GO:0016799hydrolase activity, hydrolyzing N-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0006284base-excision repair
GO:0006281DNA repair
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006284 base-excision repair
biological_process GO:0006281 DNA repair
molecular_function GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds
molecular_function GO:0004844 uracil DNA N-glycosylase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 77..98
NoneNo IPR availableSMARTSM00987UDG_2_acoord: 146..307
e-value: 3.5E-37
score: 139.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..84
IPR005122Uracil-DNA glycosylase-likeSMARTSM00986UDG_2coord: 146..307
e-value: 3.5E-37
score: 139.5
IPR005122Uracil-DNA glycosylase-likePFAMPF03167UDGcoord: 150..306
e-value: 1.5E-21
score: 76.9
IPR005122Uracil-DNA glycosylase-likeGENE3D3.40.470.10coord: 72..321
e-value: 3.6E-106
score: 353.9
IPR005122Uracil-DNA glycosylase-likeSUPERFAMILY52141Uracil-DNA glycosylase-likecoord: 101..318
IPR002043Uracil-DNA glycosylase family 1TIGRFAMTIGR00628TIGR00628coord: 103..311
e-value: 4.1E-86
score: 286.2
IPR002043Uracil-DNA glycosylase family 1HAMAPMF_00148UDGcoord: 102..318
score: 38.633
IPR002043Uracil-DNA glycosylase family 1CDDcd10027UDG_F1coord: 116..317
e-value: 2.72582E-123
score: 354.114
IPR018085Uracil-DNA glycosylase, active sitePROSITEPS00130U_DNA_GLYCOSYLASEcoord: 154..163

Blast
[Close]
BLAST of TCONS_00071320-protein vs. Swiss-Prot (Human)
Match: UNG (Uracil-DNA glycosylase OS=Homo sapiens GN=UNG PE=1 SV=2)

HSP 1 Score: 322.013 bits (824), Expect = 6.473e-110
Identity = 167/311 (53.70%), Postives = 202/311 (64.95%), Query Frame = 0 
Query:   31 QKSISSFFQKSTKRSSSNMSSPPA-------------------KIAKRNDGKENATT--TSPLSPEQKRKMEENRVKAQEKLLEKTTQEFDIGQSWKKALEPEFSKEYFGKLKNFVAAERKQKTIYPPEKDVFSWTNYFDINDTKVVIIGQDPYHGPKQAHGLCFSVQLGITPPPSLKNMYKELASDIEGFEIPSHGYLAGWASQGVLLLNACLTVVAHNANSHQGKGWEKLTDATIKWIDRNLDGVVFILWGKYAEKKGSFINKSRHLVLTGKHPSPLSAHRGFFGCKHFSKTNEYLQKQKKKPIDWNYL 320
            QK++ SFF  S  R     S  PA                      K   G+E   T  +SPLS EQ  +++ N+  A  +L  +       G+SWKK L  EF K YF KL  FVA ERK  T+YPP   VF+WT   DI D KVVI+GQDPYHGP QAHGLCFSVQ  + PPPSL+N+YKEL++DIE F  P HG L+GWA QGVLLLNA LTV AH ANSH+ +GWE+ TDA + W+++N +G+VF+LWG YA+KKGS I++ RH VL   HPSPLS +RGFFGC+HFSKTNE LQK  KKPIDW  L
Sbjct:    4 QKTLYSFFSPSPARKRHAPSPEPAVQGTGVAGVPEESGDAAAIPAKKAPAGQEEPGTPPSSPLSAEQLDRIQRNKAAALLRLAARNV-PVGFGESWKKHLSGEFGKPYFIKLMGFVAEERKHYTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSVQRPVPPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLVFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWKEL 313
The following BLAST results are available for this feature:
BLAST of TCONS_00071320-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UNG6.473e-11053.70Uracil-DNA glycosylase OS=Homo sapiens GN=UNG PE=1... [more]
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