TCONS_00071356-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071356-protein
Unique NameTCONS_00071356-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length183

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071356-protein ID=TCONS_00071356-protein|Name=TCONS_00071356-protein|organism=Clytia hemisphaerica|type=polypeptide|length=183bp
MSEVDIKKRHRGIPEATFLEDVEEFMKKEESFESALRKLDEQYQKYKFME
SNLVQKKVRLNGQIPDIKSTLNSIKCLKSKKDSDKSLSTQFMLSDQLYVN
AKVPVTKKVCLWLGANVMLEYDIEDAEKLLQKNLTTAETNLEELSDDLCF
LRDQITTTEVSMARVYNFDVKKRQQQKAVAATT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044342XLOC_044342Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071356TCONS_00071356Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004127Prefoldin_subunit_alpha
IPR016655PFD3
Vocabulary: Cellular Component
TermDefinition
GO:0016272prefoldin complex
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
cellular_component GO:0016272 prefoldin complex
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 127..147
NoneNo IPR availableCOILSCoilCoilcoord: 22..42
NoneNo IPR availableGENE3D1.10.287.370coord: 30..178
e-value: 3.4E-39
score: 133.7
NoneNo IPR availableCDDcd00584Prefoldin_alphacoord: 36..167
e-value: 2.4468E-23
score: 89.5963
NoneNo IPR availableSUPERFAMILY46579Prefoldincoord: 35..165
IPR004127Prefoldin alpha-likePFAMPF02996Prefoldincoord: 46..167
e-value: 1.1E-33
score: 115.6
IPR016655Prefoldin subunit 3PIRSFPIRSF016396Prefoldin_3coord: 1..183
e-value: 1.2E-69
score: 231.0

Blast
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BLAST of TCONS_00071356-protein vs. Swiss-Prot (Human)
Match: PFD3 (Prefoldin subunit 3 OS=Homo sapiens GN=VBP1 PE=1 SV=3)

HSP 1 Score: 220.32 bits (560), Expect = 8.023e-74
Identity = 107/177 (60.45%), Postives = 139/177 (78.53%), Query Frame = 0 
Query:    1 MSEVDIKKRHRGIPEATFLEDVEEFMKK--EESFESALRKLDEQYQKYKFMESNLVQKKVRLNGQIPDIKSTLNSIKCLKSKKDSDKSLSTQFMLSDQLYVNAKVPVTKKVCLWLGANVMLEYDIEDAEKLLQKNLTTAETNLEELSDDLCFLRDQITTTEVSMARVYNFDVKKRQQ 175
            M+  + ++ H GIPEA F+EDV+ FMK+   E+ ++ L+KLDEQYQKYKFME NL QKK RL GQIP+IK TL  +K ++ KK+S  S+ T+F+L+D LY  A VP T K+CLWLGANVMLEYDI++A+ LL+KNL+TA  NL+ L +DL FLRDQ TTTEV+MARVYN+DVK+R +
Sbjct:   13 MATGNGRRLHLGIPEAVFVEDVDSFMKQPGNETADTVLKKLDEQYQKYKFMELNLAQKKRRLKGQIPEIKQTLEILKYMQKKKESTNSMETRFLLADNLYCKASVPPTDKMCLWLGANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVKRRNK 189
The following BLAST results are available for this feature:
BLAST of TCONS_00071356-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PFD38.023e-7460.45Prefoldin subunit 3 OS=Homo sapiens GN=VBP1 PE=1 S... [more]
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