TCONS_00071377-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071377-protein
Unique NameTCONS_00071377-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length685

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071377-protein ID=TCONS_00071377-protein|Name=TCONS_00071377-protein|organism=Clytia hemisphaerica|type=polypeptide|length=685bp
MNVIDRVESAKHTLTGSGIGKAVSKATSHEIIGPKRKHVDYITHSLEATN
ISIPEVADSLFERCNNSSWVVVFKSLVTAHHLMANANERFIQYVASRQTP
WMLQTFLDKGGIQGYDMSHAVRRYSTYLAEKAYSYRQMGYDFCRAARGRD
KGVLRNMDTTKLLKALPVIQQQIDSLISTEINSNDLTNGVITAAFMLLFK
DLIRIFACYNDGIINLLEKYFEMKKLDCRNALEIYKKFLSRMERVSEFLK
TAEDAGIDKGDIPDLTKAPGSLLEALEQHLTSLEKGKSAAPPTKPLTLPA
FSGDSSISAFSQPASATFQQPPPVQASNKEESDYLTEQRKILEAFEKKKQ
SQDVVVQQNNVVPNPLNPPASKQHQQSVKSPFAPSQPFAAPSQPAQQPTQ
QPTLNGSASTNNKPSDDLLMLGGSSNAFSVQNTMPSSNFASAFNSTPSYG
QPQQNMFAQQQQSVDFNNAFNNTSTSATVNSSSTPNLIDDLLQPERPSSS
SAAMTTMDSNVRMTGDLDTGLQRMAQSLDGLNINPNTMKANTSKGHQWNQ
RGETKLTGGNNYQIRNVTPSTLPPMNTMGGMGGAPMGGMQPQGIIGMNSM
GMMGQQQQFQMQPQQQFYGMNQRPAFGGGMMQPQQGGMYNANMGMSASAT
GGFNGMQMRPQQQPMMMGGGMNSNNPMMMNNDPFK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044355XLOC_044355Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071377TCONS_00071377Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013809ENTH
IPR011417ANTH_dom
IPR008942ENTH_VHS
IPR014712Clathrin_AP_2
Vocabulary: Molecular Function
TermDefinition
GO:0005543phospholipid binding
GO:00055451-phosphatidylinositol binding
GO:0030276clathrin binding
Vocabulary: Cellular Component
TermDefinition
GO:0030136clathrin-coated vesicle
Vocabulary: Biological Process
TermDefinition
GO:0048268clathrin coat assembly
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048268 clathrin coat assembly
cellular_component GO:0030136 clathrin-coated vesicle
molecular_function GO:0005545 1-phosphatidylinositol binding
molecular_function GO:0030276 clathrin binding
molecular_function GO:0005543 phospholipid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013809ENTH domainSMARTSM00273enth_2coord: 17..142
e-value: 1.8E-21
score: 87.3
IPR013809ENTH domainPROSITEPS50942ENTHcoord: 11..142
score: 26.67
IPR011417AP180 N-terminal homology (ANTH) domainPFAMPF07651ANTHcoord: 21..280
e-value: 5.6E-70
score: 235.4
IPR008942ENTH/VHSGENE3D1.25.40.90coord: 1..143
e-value: 1.8E-33
score: 114.8
IPR008942ENTH/VHSSUPERFAMILY48464ENTH/VHS domaincoord: 20..144
IPR014712Phosphoinositide-binding clathrin adaptor, domain 2GENE3D1.20.58.150coord: 144..292
e-value: 4.7E-59
score: 198.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 311..335
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 540..575
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 360..423
NoneNo IPR availableCDDcd03564ANTH_AP180_CALMcoord: 21..135
e-value: 1.53428E-32
score: 121.172
NoneNo IPR availableSUPERFAMILY89009GAT-like domaincoord: 152..281

Blast
[Close]
BLAST of TCONS_00071377-protein vs. Swiss-Prot (Human)
Match: PICAL (Phosphatidylinositol-binding clathrin assembly protein OS=Homo sapiens GN=PICALM PE=1 SV=2)

HSP 1 Score: 419.083 bits (1076), Expect = 5.636e-138
Identity = 274/660 (41.52%), Postives = 369/660 (55.91%), Query Frame = 0 
Query:    2 NVIDRVESAKHTLTGSGIGKAVSKATSHEIIGPKRKHVDYITHSLEATNISIPEVADSLFERCNNSSWVVVFKSLVTAHHLMANANERFIQYVASRQTPWMLQTFLDKGGIQGYDMSHAVRRYSTYLAEKAYSYRQMGYDFCRAARGRDKGVLRNMDTTKLLKALPVIQQQIDSLISTEINSNDLTNGVITAAFMLLFKDLIRIFACYNDGIINLLEKYFEMKKLDCRNALEIYKKFLSRMERVSEFLKTAEDAGIDKGDIPDLTKAPGSLLEALEQHLTSLE--KGKSAAPPTKPLTLPAFSGDSSISAFSQPASATFQQPPPVQASNKEESDYLTEQRKILEAFEKKKQSQDVVVQQNNVVPNPLNP-----------PASKQHQQSVKSPFAPSQP--FAAPSQPAQQPTQQPTLNGS--ASTNNKPSDDLLMLGGSSNAFSVQNTMPSSN------------FASAFNSTPSYGQPQQNMF--------AQQQQS----VDFNNAFNNTSTSATVNSSSTPNLIDDLLQPERPS-SSSAAMTTMDSNVRMTGDLDTGLQRMAQSLDGLNINPNTMKANTSKGHQWNQRGETKLTGGNNYQIRNVTPSTLPPMNTMGGMGGAPMGGMQPQGIIG------MNSMGMMGQQQQFQMQP 613
            ++ DR+ +A+H++TGS + K V KAT+HEI+GPK+KH+DY+       N++IP++ADSLFER  NSSWVVVFKSL+T HHLM   NERFIQY+ASR T + L  FLDK G+QGYDMS  +RRYS YL EKA SYRQ+ +DF +  RG D GV+R M+T KLLK +P+IQ Q+D+L+   +NSN+LTNGVI AAFMLLFKD IR+FA YN+GIINLLEKYF+MKK  C+  L+IYKKFL+RM R+SEFLK AE  GID+GDIPDL++AP SLL+ALEQHL SLE  K K +   ++  TL         +A S  AS         +   +E+   L E++  L+A  K+++ +++  + +  +    +P           PA         S      P       QP   P+  P    S  AST   P         S+   +V + +PS N              S+  ST +   P   MF        AQ   S    VDF + F N ST+  V+S     L   LL+P   S + +  +  +  +  ++ DLD+ L   A  +  L I   T K + +    W+Q GE KLTGG+N+Q + V P+T     TM     A      P G+IG      M S+ +M Q      QP
Sbjct:    5 SLTDRITAAQHSVTGSAVSKTVCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLFERTTNSSWVVVFKSLITTHHLMVYGNERFIQYLASRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQVAFDFTKVKRGAD-GVMRTMNTEKLLKTVPIIQNQMDALLDFNVNSNELTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLTRMTRISEFLKVAEQVGIDRGDIPDLSQAPSSLLDALEQHLASLEGKKIKDSTAASRATTLS--------NAVSSLASTGLSL---TKVDEREKQAALEEEQARLKAL-KEQRLKELAKKPHTSLTTAASPVSTSAGGIMTAPAIDIFSTPSSSNSTSKLPNDLLDLQQPTFHPSVHPMSTASQVASTWGDPF--------SATVDAVDDAIPSLNPFLTKSSGDVHLSISSDVSTFTTRTPTHEMFVGFTPSPVAQPHPSAGLNVDFESVFGNKSTNVIVDSGGFDEL-GGLLKPTVASQNQNLPVAKLPPSKLVSDDLDSSL---ANLVGNLGIGNGTTKNDVN----WSQPGEKKLTGGSNWQPK-VAPTTAWNAATMAPPVMA-YPATTPTGMIGYGIPPQMGSVPVMTQPTLIYSQP 633
The following BLAST results are available for this feature:
BLAST of TCONS_00071377-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PICAL5.636e-13841.52Phosphatidylinositol-binding clathrin assembly pro... [more]
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