TCONS_00071536-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071536-protein
Unique NameTCONS_00071536-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length141

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071536-protein ID=TCONS_00071536-protein|Name=TCONS_00071536-protein|organism=Clytia hemisphaerica|type=polypeptide|length=141bp
TFGVSDDGARAGVVTFSYYSEHSIKLNDHTELSTFNDAVDKISLMGSTTR
IDKALRMVQNDMFTIANGARPGVNKVLIVLTDGSQTQDAGAEDPGDVAKE
LRDKGIRVISIGIGKGVNPAELARIAGDQSNVFSASSFEEL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044437XLOC_044437Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071536TCONS_00071536Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 1..141
e-value: 8.1E-5
score: 32.0
IPR002035von Willebrand factor, type AGENE3D3.40.50.410coord: 1..141
e-value: 2.0E-28
score: 99.0
IPR002035von Willebrand factor, type APFAMPF00092VWAcoord: 2..141
e-value: 6.9E-30
score: 104.5
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 1..141
score: 21.594
IPR002035von Willebrand factor, type ASUPERFAMILY53300vWA-likecoord: 2..141

Blast
[Close]
BLAST of TCONS_00071536-protein vs. Swiss-Prot (Human)
Match: CO6A5 (Collagen alpha-5(VI) chain OS=Homo sapiens GN=COL6A5 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 5.924e-16
Identity = 48/135 (35.56%), Postives = 72/135 (53.33%), Query Frame = 0 
Query:    7 DGARAGVVTFSYYSEHSIKLNDHTELSTFNDAVDKISLMGSTTRIDKALRMVQNDMFTIANGARPGVNKVLIVLTDGSQTQDAGAEDPGDVAKELRDKGIRVISIGIGKGVNPAELARIAGDQSNVFSASSFEEL 141
            D  + GVV FS  ++   +LN +      +DA+D++SL+   T   KAL  V    FT + GAR G  K LI++TDG        +D  D A+ LR K + + S+G+    N ++L  I+GD S VF   +F+ L
Sbjct:  663 DKTQIGVVQFSDKTKEEFQLNRYFTQQEISDAIDRMSLINEGTLTGKALNFV-GQYFTHSKGARLGAKKFLILITDG-----VAQDDVRDPARILRGKDVTIFSVGV-YNANRSQLEEISGDSSLVFHVENFDHL 790
The following BLAST results are available for this feature:
BLAST of TCONS_00071536-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CO6A55.924e-1635.56Collagen alpha-5(VI) chain OS=Homo sapiens GN=COL6... [more]
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