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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00071739-protein ID=TCONS_00071739-protein|Name=TCONS_00071739-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1827bp
VNETKTMSCKLCNVTFNCRKDEKEHSWSLLHHRKLFRAEGRDAVHKCCLC
DETCNSFALFTKHINSDKHRSLMTKWIRLDINDKDSPTAGEEGAGEKCAK
TTAAKVQANKQNGQQSASKDSNNFQDDFHWKNNNHQFRQPPPPRIPFYQN
NFQYQQRLPFIPRGFPPRPGFHPRPEFGNIFRPNIKRFPKRNYPSPTQTK
DSCQQEPHNPYDPNNIRLPYNNNSSSSWSKKPTPSTKQSEKAKTPTKNEP
TTLQLLQNSVKMAISTTTSIPLIKANKADSTNAGIIEARTPSQGESSSDE
DVPLSEIINSRKSKYVEKLKNYIAQPEHSSATHSSNNAKKVVIAGGKIVS
VSSSSPKSIQQKSNIEQDESGEESRLSNSESDSNSLLSLYTESKRVHLLA
DKMKNSSSSKQTLTKQMSENSSQSDDDELPAVLSQVPKKSKRIADRTKQI
LEEASKKVLSPEKEKNSNPISQENVTTKDILSSISSNSEEIRTSENLTNV
NQKSTSKTGIKGPLDTESDISTNMTSLDDTNELLDRLEQQTHTDLPTVDI
NHPSTERVPISKKLRPVSVKLKKLGSKIKPLLDNKKSALTENRTNRNLEK
DDNMEMEHESSNDQEESTQKSALQRFKSNQCAFKKPGNTQCDENTTKKFC
EYHERVLLAVEAFVSQKASTIPDKKSVSAVSFIEPTSDVEIPKSPKHTMP
FKRKHSLSESENHTETVTNLDMSRFKRSRSNRERSNSTCQSSTDDNGTTS
LSSAAPVKTSLRGSRFKYLNNLGSSSTVNDLHLTNLPPTVRKLIEKKTRR
RRNSQSESEGDIQMTDNIQEHLETEISDNTSQNERQTDNPDTHFSIEIPP
FVEPESSTSEITAPPVPVLPMGQNLTEKKTKDVMNFKIEEQQTRESKSTS
INTRVHLEEQKDIVTSDKGLSSTPSNIPLPCPDISGIDANPKFDLDELPQ
PNLDNASISLPPPLADQDDNTNLSFDDSFKTVNETIPIQSQGTLIEGKDS
SEIQDDCVENKFNNFHDVIEDNAINETHYKSLDDAPDLQIEDTDLNETES
PSTPMELDTVERFNKEELTEKVISENKENETNFESMNEEAFDQQFDDGSS
TENANIQLQNELDTVSQTTELTIKSTEINVESTSERTCSSKFNEGEVGTS
SDIEQQVSETLMNLKAPQYSSLAAEFNSIEKFPMKLDSLSSSDPETRHLI
HLKERMVKSMKYPTVVERTKCLESSKLKDKNLEPFVIDSQPQLTNNSTGQ
KISDSTVKSSRGESTPIVEDVESSQQINMNTFRAMDNNKETSIKTSTTKT
STQSHFKIVASKDVSSSIFQSTRSTTESLATLPSSITPTATIPTSSYTKK
VMTTKKVVSATTRVDIGNTTNSKKKKEKMKKTIGPIPVLGNTLSELHLEE
NKYLVKLAKANVNMSDLKKKVAALQTTIATYTTHIQRINEKKKKLITDIS
ENAKISTDGFSSSSEPYFHTESFDESVLTTTASSSRYATPSGSPSVSDVL
NQSIHETSQRNTLVKSIKIFSKLSSPVRWAKVYKNDLFVACDKPNCKILC
KTMQPNAAEEVIIKQQRPLKCMEVYQYDDRFLLCTGCSSGMVTFYQKNPS
NQWTILEKMRIACGGCLSMHTAFDSLFVGFLDGTIQKISKSKRKGELFEK
RLFPRLGKKRRGVNDMCSYQRDGDGMNILYVATRGGTIYARKVDGEVEHW
FKQPQSVEIMKIKISNRRLYTLNANHTLSLFSLRGDLFSNVNINPNFKIN
YTLSCFVDLSLYLVDDVTHARVFRLGLENLTNGDEGGGIIENEIYQCKRR
SQITLIGYSGGKIILALSSGDVLAFEL Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR011042 | 6-blade_b-propeller_TolB-like |
| IPR017986 | WD40_repeat_dom |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 1407..1427 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 352..385 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 792..816 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 689..756 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 585..623 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 83..143 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 402..525 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 174..254 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1240..1268 |
| IPR011042 | Six-bladed beta-propeller, TolB-like | GENE3D | 2.120.10.30 | | coord: 1503..1824
e-value: 2.5E-5
score: 23.1 |
| IPR017986 | WD40-repeat-containing domain | SUPERFAMILY | 50978 | WD40 repeat-like | coord: 1522..1819 |
Blast
The following BLAST results are available for this feature:
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