Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00072097-protein ID=TCONS_00072097-protein|Name=TCONS_00072097-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2381bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00072097-protein vs. Swiss-Prot (Human)
Match: RN213 (E3 ubiquitin-protein ligase RNF213 OS=Homo sapiens GN=RNF213 PE=1 SV=3) HSP 1 Score: 637.876 bits (1644), Expect = 0.000e+0 Identity = 373/912 (40.90%), Postives = 534/912 (58.55%), Query Frame = 0 Query: 2 LPQNDTDFIENLISLLTASQKYMRSRKNECSFVSLRDVERSVQVASWFYK-------------VYTGYQLQNCPKDILKQILILTIAVCYIARLEKRHEFLKYIAPFFKGRFHFDGGTLKLKELIKDYQREFVDDLQVKENIAKNEALCENIFMMVVCIELRIPLFIVGKPGSSKSLAKTIIQDNMQGSSSASPLFRKFKEIFVTSYQCSPHSTADGIISVFRQAQNYQQDRNLDLFASVVVLDEVGLAEDSPKMPLKALHPLLEDGTDGFEDLRDAEKEEARYRKTTGAEKRVAFIGISNWALDPAKMNRGIMLKRNMLDLTELISTASEICSSNERIRDKIKFLLKPLSEAFYKLYNMQKENPTLIKHRKEEFFGMRDFYSLIKMIFCAAKFYNGMPPLHEIELAVLRNFSGLEQYDMWAIFRDVLTSSPLANALGTIELEISAADMIRKNFEKNCLCCSLTPTVK------RCQTNRYLLIMTEKYSSLPIIKGMELDVPENLSVIFGSSFPKDQEFTQVCRDINKIKICMETGRTVILLNMENLYESLYDALNQYYVEFGGKNYVDLGLGTHRVRCRVHEDFKLIVVADKKVVYELFPIPLINRLEKHFLTMTSSLEPYQLRHAKELMEWAKQVASN-----SNRSKSTEEGMFVGYNSDTCGAIIMQLCQ----KGVQED---QLFERGQDALIKIATPDGILRSK--------NKHMIQTYFNNQKHDSLKLYLQDQLSSQNPSK---YLQVTTHSRLLSLNECQT----IAGEDSSVTMFSLVQFETDHSFRHSIKTFLETKKSDEQKNFLF-IQYNMTATSGNLITCAQH-ITEELCLQHTLQDNTFIVFILQITRRFDSTLSGLSCSQAHWDYIHIDDLREPDIHMPSFMKYLDRPMSDLFAP 865 L +N T I +L ASQ +MR ++ECSFVSLRDVER V+V WF++ + + +D + L+L I VCY A LEK+ + K IA FF + D L L E+ + Q F+D + +++ IAKN AL EN+FMMVVCIEL+IPLF+VGKPGSSKSLAKTI+ D MQG ++ S LFR K++ + S+QCSPHST GIIS FRQ +QQ ++L + SVVVLDEVGLAEDSPKMPLK LHPLLEDG ED K+V F+GISNWALDPAKMNRGI + R + TELI +A ICSS+ ++D+++ ++A+ T+ K + +EFFG+RD+YSLIKM+F AAK N P +I AVLRNFSG + IF L + P A E+S +I++N P+ K +RYLL++T+ Y +L I++ + + +IFGS FPKDQE+TQ+CR+IN++KICMETG+ V+LLN++NLYESLYDALNQYYV GG+ YVDLGLGTHRV+CRVH +F+LIV+ +K VVY+ FPIPLINRLEKH+L + + LE +Q +EL W ++ + R K + +F+GY+SD C ++++Q+ + + + E+ ++ E + L+ ATPD ++R + + Q YF+ Q+H+S +LQ L + + + + ++TT SRLL+ ++C+ + G T+ L QF+T++SF ++ L + + K +F + S LI A++ + E+ +D F+ FI +++R T + + W +HIDDLR + + + +S LFAP Sbjct: 2607 LDENGTRVI---TEVLCASQGFMRKTEDECSFVSLRDVERCVKVFRWFHEHSAMLLAQLNAFLSKSSVSKNHTERDPVLWSLMLAIGVCYHASLEKKDSYRKAIARFFPKPY--DDSRLLLDEITR-AQDLFLDGVPLRKTIAKNLALKENVFMMVVCIELKIPLFLVGKPGSSKSLAKTIVADAMQGPAAYSDLFRSLKQVHLVSFQCSPHSTPQGIISTFRQCARFQQGKDLQQYVSVVVLDEVGLAEDSPKMPLKTLHPLLEDGC--IED-------------DPAPHKKVGFVGISNWALDPAKMNRGIFVSRGSPNETELIESAKGICSSDILVQDRVQGYFASFAKAY----------ETVCKRQDKEFFGLRDYYSLIKMVFAAAKASNRKPSPQDIAQAVLRNFSGKDDIQALDIF---LANLPEAKC----SEEVSPMQLIKQNI--------FGPSQKVPGGEQEDAESRYLLVLTKNYVALQILQQTFFEGDQQPEIIFGSGFPKDQEYTQLCRNINRVKICMETGKMVLLLNLQNLYESLYDALNQYYVHLGGQKYVDLGLGTHRVKCRVHPNFRLIVIEEKDVVYKHFPIPLINRLEKHYLDINTVLEKWQKSIVEELCAWVEKFINVKAHHFQKRHKYSPSDVFIGYHSDACASVVLQVIERQGPRALTEELHQKVSEEAKSILLNCATPDAVVRLSAYSLGGFAAEWLSQEYFHRQRHNSFADFLQAHLHTADLERHAIFTEITTFSRLLTSHDCEILESEVTGRAPKPTLLWLQQFDTEYSFLKEVRNCL--TNTAKCKILIFQTDFEDGIRSAQLIASAKYSVINEINKIRENEDRIFVYFITKLSRVGRGT-AYVGFHGGLWQSVHIDDLRRSTLMVSDVTRLQHVTISQLFAP 3469 HSP 2 Score: 144.821 bits (364), Expect = 4.733e-34 Identity = 187/793 (23.58%), Postives = 342/793 (43.13%), Query Frame = 0 Query: 1616 IDGGLKQLLHHFNCIMDHCDDPQSLLYFFKVIKTEPLQSQKWYFPTMPSDPFAVVDEFRKKNTNMNFVPHACPNGHIYVITECGRAYTEAKCPEKGCGLRIGGHAHILDDKNKKVESR-DNTERGHCLGSIKERKYDSGERDLNNLSTALIRFLLHMAMLSGDAYKTNQALNIALKE--RDGTSVESFLISHLKKDLEFIKSSLDRNNEETRLALH-VLLKIIADKKSTS----LGFNLPEMRDQKKRSELETRLDQVFIQPFCHSYEMELRKFQNALADTQTIYRD-----LYEIEIKENTSLSPFNVMTSTFLWCYRLPVTFNHFKGLLQNKASSNSEGNRQLITLFEKTYIYEIMELLPDIIEFQSILYKHL-NFQLDKATSRQTTLKSVLETLPVDSGKRLNGLKESIF-KVWNILRSDLKNHGLFQREKNFPGNEMNENWPISFLLSSDSGDGRYLKTLLVLMATAQNELLGSYKELATLPTPLIKKECRELDKSDVIIYRPEEDLKPLVYRYSDFSIRCGEGRFVTYHYDNIETRLMEHVCFDKCLIDTASIPIYRYQDEIRGTDRFLNLSRKMKQVAIGPSEQRQMMSELIGVHQVSDTLKGVEIAIGFLSSTGGEPSLLYAEYLKDILHMELEKFLPSMKMQDEITLSHLSSCWTMLTV---ERALR-SQNPFA-CEEIFMEGLDFDQLAQTRLILDRLDLHILIGLLTEYIVCDLPMRGPNDVT-------FELGEALFLYNEERKAYDTDLIESMIEQIPMDIQVAHAEPFWREVAAAFKQNQ 2381 +DG + ++ H ++ C LL K + P + PTMP D A + R+ + CPNGH + ECGR ++ C + C IGG H D V+ + D T+ GH LG+ + R + +R L + LIR L H+A+L G A +++QAL +K RD + FL H+ KDLE + L + +ET +H VL +++ ++ S L F+ E+ ++ R+ E + V I P + L N ++ + I + +Y + L +V+ + +W R +T + + +++ K + E L +K +++ LP+I+ Q L K N Q + +S ++ L D ++L + ++F WN LR L+ +G K++ +++ + LL G G L+ + NE++ + ++L+ + E+ + VI Y E DL PL+ + + G + + I+ +++ K + IP Y+ + F+++ KM Q ++ S + +L + L VE+ +GFLS+ GG+P++ Y +DIL M ++ + +K + L H + W L+ E+ LR + PF + L + L++ L + L E I+ L ++ P T + L + L Y + + +++++ M Q P +I +A W+ AA K N+ Sbjct: 4439 LDGTVTEMAIHAAAVL-LCGQ-NELLEPLKNLAFSPATMAHAFLPTMPEDLLA---QARRWKGLERVHWYTCPNGHPCSVGECGRPMEQSICID--CHAPIGGIDHKPRDGFHLVKDKADRTQTGHVLGNPQRRDVVTCDRGLPPVVFLLIRLLTHLALLLG-ASQSSQALINIIKPPVRDP---KGFLQQHILKDLEQLAKMLGHSADETIGVVHLVLRRLLQEQHQLSSRRLLNFDT-ELSTKEMRNNWEKEIAAV-ISPELEHLDKTLPTMNNLISQDKRISSNPVAKIIYGDPVTFLPHLPRKSVVHCSKIWSCRKRITVEYLQHIVEQK--NGKERVPILWHFLQKEAELRLVKFLPEILALQRDLVKQFQNVQQVEYSS----IRGFLSKHSSDGLRQLLHNRITVFLSTWNKLRRSLETNGEINLPKDYCSTDLDLDTEFEILLPRRRGLGLCATALVSYLIRLHNEIVYAVEKLSK-ENNSYSVDAAEVTELHVISYEVERDLTPLILSNCQYQVEEGRETVQEFDLEKIQRQIVSRFLQGKPRLSLKGIPTLVYRHDWNYEHLFMDIKNKMAQDSLPSSVISAISGQLQSYSDACEVLSVVEVTLGFLSTAGGDPNMQLNVYTQDILQMG-DQTIHVLKALNRCQLKHTIALWQFLSAHKSEQLLRLHKEPFGEISSRYKADLSPENAKLLSTFLNQTGLDAFLLELHEMII--LKLKNPQTQTEERFRPQWSLRDTLVSYMQTK---ESEILPEMASQFPEEILLASCVSVWK-TAAVLKWNR 5204 The following BLAST results are available for this feature:
BLAST of TCONS_00072097-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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