TCONS_00072663-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00072663-protein
Unique Name	TCONS_00072663-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	478

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00072663-protein ID=TCONS_00072663-protein|Name=TCONS_00072663-protein|organism=Clytia hemisphaerica|type=polypeptide|length=478bp
DSQRSFSESLEDISWLDLKRELQMMGKYELVDHIINKTLITKGLKAASDG
LRRHYVNDLIHCLVEQPLSQADEDTNSVLREDVFIDLVVLPSSTVDKEWS
NSDRAALMEQQNIPKTSTKRAVNNIFSQKDELVFVRGIGGIGKTTLLEML
TYKWAKGELDAEVNIDFVFKFTCRNLNTISSQFTNVQKLFELKYPEVMKL
ISFDDLMEISERVLIVINGFDELKDLYLPESSSASNRDSLNLTVFNLINP
KADCLPNHKVIACGRPKAVEFLKKEIPINSNRKNIEVCGFDDENILKYIQ
NFFGERKDKAFSVHQLIERSYNLRIMARVPVFLSVICTVFEEDLIKNPIN
TQTELYFFTTLIFIRNYLKRQSQSYTNLMDITKDKTVAEILLCLMKLSVT
TYMQNKVVFSEAEIASLRCPIPLEETGFITKHQRSNSTEVTFQFRHLILH
EYLTGLYISITKDITPFFGNKELSSCKP

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_045107	XLOC_045107	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00072663	TCONS_00072663	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007111	NACHT_NTPase
IPR027417	P-loop_NTPase

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.300		coord: 93..320 e-value: 7.4E-5 score: 22.0
None	No IPR available	PFAM	PF05729	NACHT	coord: 132..304 e-value: 3.1E-18 score: 66.1
IPR007111	NACHT nucleoside triphosphatase	PROSITE	PS50837	NACHT	coord: 131..223 score: 13.09
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 120..348

Blast

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BLAST of TCONS_00072663-protein vs. Swiss-Prot (Human)
Match: NOD2 (Nucleotide-binding oligomerization domain-containing protein 2 OS=Homo sapiens GN=NOD2 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 9.007e-20
Identity = 91/365 (24.93%), Postives = 160/365 (43.84%), Query Frame = 0

Query:  115 KTSTKRAVNNIFSQKDEL------VFVRGIGGIGKTTLLEMLTYKWAKGELDAEVNIDFVFKFTCRNLNTISSQFTNVQKLFE-LKYPEVMKLISFDDLMEISERVLIVINGFDELKDLYLPESSSASNRD--SLNLTVFNLINPKADCLPNHKVIACGRPKAVE-FLKKEIPINSNRKNIEVCGFDDENILKYIQNFFGERKDKAFSVHQLIERSYNLRIMARVPVFLSVICTVFEEDLIK--NPINTQTELYFFTTLIFIRNYLKRQSQSYTNLMDITKDKTVAEILLCLMKLSVTTYMQNKVVFSEAEIASLRCPIPLEETGFITKHQR-SNSTEVTFQFRHLILHEYLTGLYISITKDITP 466
            K+     +  +FS    L      V V G  G GK+TLL+ L   WA G+   E    FVF F+CR L  ++   +    LFE   +P+V +   F  L++  +RVL+  +GFDE K  +       S  D  S+   +FNL+  + + L N + +   RP AV  FL+K I    N K     GF ++ I  Y++    E    A  + +L++ +  L  +  +PVF  ++    +E L++      T T++Y      F+ +     S S      + + +     LL L +L++        VFS  ++ + +        GF+ + +     +    +F H+    +    Y++++ D+ P
Sbjct:  271 KSPATLGLEELFSTPGHLNDDADTVLVVGEAGSGKSTLLQRLHLLWAAGQDFQE--FLFVFPFSCRQLQCMAKPLSVRTLLFEHCCWPDVGQEDIFQLLLDHPDRVLLTFDGFDEFKFRFTDRERHCSPTDPTSVQTLLFNLL--QGNLLKNARKVVTSRPAAVSAFLRKYIRTEFNLK-----GFSEQGIELYLRKRHHE-PGVADRLIRLLQETSALHGLCHLPVFSWMVSKCHQELLLQEGGSPKTTTDMYLLILQHFLLHATPPDSASQGLGPSLLRGRL--PTLLHLGRLALWGLGMCCYVFSAQQLQAAQVSPDDISLGFLVRAKGVVPGSTAPLEFLHITFQCFFAAFYLALSADVPP 623

The following BLAST results are available for this feature:

BLAST of TCONS_00072663-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00072663-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NOD2	9.007e-20	24.93	Nucleotide-binding oligomerization domain-containi...	[more]

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TCONS_00072663-protein (polypeptide) - C. hemisphaerica