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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00073199-protein ID=TCONS_00073199-protein|Name=TCONS_00073199-protein|organism=Clytia hemisphaerica|type=polypeptide|length=391bp
MASKEDLVKSIIIKQNSGESSSKSETNAKSQTEETTTVEVIVSKTSATEG
SSETGQEYVYWARRGENELETAGEVEVSSSGVEQENVNPEECGELLLVRE
TEANGAQISSVRDPNSLVYGLQVAAEQITAAHEIQTAGEAAEAFGQITEE
FIEQQQRLEAKREAAKLQEKLMNEEYQKAIGYLLCSSKSKSGKQKKKQTM
TAYLFFCRRYRAKIVARNPKLSFAQISKLLSHMWRNASEQEKNTYRLKLE
QHRTKVNAIVEKNMIEKMKMVKQQKLMEEIQRRSDEEHPLIATSSAELHD
YEVVQQHQQEDSEDVHQEEIPVEEEEESQEESQLSIIESLEKESVAAAAE
ITQTTDDGEQEEETVEQNEEPEISHAVIDPQTKMMLLEGES Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR009071 | HMG_box_dom |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 148..177 |
| None | No IPR available | COILS | Coil | Coil | coord: 235..255 |
| None | No IPR available | COILS | Coil | Coil | coord: 337..357 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 348..391 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 303..335 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..54 |
| None | No IPR available | CDD | cd00084 | HMG-box | coord: 200..253
e-value: 1.65878E-11
score: 58.3991 |
| IPR009071 | High mobility group box domain | SMART | SM00398 | hmgende2 | coord: 195..265
e-value: 6.9E-11
score: 52.2 |
| IPR009071 | High mobility group box domain | PFAM | PF00505 | HMG_box | coord: 197..257
e-value: 2.9E-14
score: 53.1 |
| IPR009071 | High mobility group box domain | GENE3D | 1.10.30.10 | | coord: 198..256
e-value: 2.4E-15
score: 56.1 |
| IPR009071 | High mobility group box domain | PROSITE | PS50118 | HMG_BOX_2 | coord: 196..264
score: 12.956 |
| IPR009071 | High mobility group box domain | SUPERFAMILY | 47095 | HMG-box | coord: 187..254 |
Blast
The following BLAST results are available for this feature:
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