TCONS_00073647-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00073647-protein
Unique Name	TCONS_00073647-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	567

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00073647-protein ID=TCONS_00073647-protein|Name=TCONS_00073647-protein|organism=Clytia hemisphaerica|type=polypeptide|length=567bp
MACWKPRVWKNILSNGVRIKRYHDLSRAGVLNSTINKNTAEFKENEHQMS
ELVEDLKGVCTKIKDGGGEKAKQRHLSRNKLLPRERISSVLDPGSPFLEL
SQLAGYNLYGKEEVPAGGIIAGIGKVSGVECMIVANDPTVKGGSYYPITI
KKHLRAQEIATENNLPCIYLVDSGGANLPRQTEVFPDKEHFGRIFYNQAN
MSAKKIPQIAVVLGSCTAGGAYIPAMADESIIVRNQGTVFLAGPPLVKAA
LGEEVTAEQLGGADLHCRKSGVTDHYAVDDFHALHLARQCIKNINYQKEN
QVVTQDPNEPAYPIEDLYGIVGANLKRSFDVREVIARIVDSSEFDEFKAL
YGETVVTGFARIHGYPVGIIGNNGVLHSESALKASHFIELCCQRKIPLVF
LQNITGFMVGKDAEAGGIAKNGAKMVTAVACANVPKFTVIIGGSYGAGNY
GMCGRAYNPRFLFMWPNARISVMGGEQAGTVLSTVKKAQLMKQGQEITPE
IEAKIDAELKAPLVKQFDKEGHPYFASARLWDDGVIDPKDTRTVLGLAVS
ASLNAKIQPTKFGVFRM

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_045735	XLOC_045735	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00073647	TCONS_00073647	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR034733	AcCoA_carboxyl
IPR011762	COA_CT_N
IPR011763	COA_CT_C
IPR029045	ClpP/crotonase-like_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0016874	ligase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016874	ligase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.226.10		coord: 36..300 e-value: 1.3E-71 score: 240.4
None	No IPR available	GENE3D	3.90.226.10		coord: 301..563 e-value: 5.2E-69 score: 232.1
IPR034733	Acetyl-CoA carboxylase	PFAM	PF01039	Carboxyl_trans	coord: 75..557 e-value: 4.8E-154 score: 513.6
IPR011762	Acetyl-coenzyme A carboxyltransferase, N-terminal	PROSITE	PS50980	COA_CT_NTER	coord: 49..306 score: 59.303
IPR011763	Acetyl-coenzyme A carboxyltransferase, C-terminal	PROSITE	PS50989	COA_CT_CTER	coord: 309..559 score: 54.216
IPR029045	ClpP/crotonase-like domain	SUPERFAMILY	52096	ClpP/crotonase	coord: 51..295
IPR029045	ClpP/crotonase-like domain	SUPERFAMILY	52096	ClpP/crotonase	coord: 265..548

Blast

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BLAST of TCONS_00073647-protein vs. Swiss-Prot (Human)
Match: MCCB (Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Homo sapiens GN=MCCC2 PE=1 SV=1)

HSP 1 Score: 783.482 bits (2022), Expect = 0.000e+0
Identity = 379/548 (69.16%), Postives = 452/548 (82.48%), Query Frame = 0

Query:   20 KRYHDLSRAGVLNSTINKNTAEFKENEHQMSELVEDLKGVCTKIKDGGGEKAKQRHLSRNKLLPRERISSVLDPGSPFLELSQLAGYNLYGKEEVPAGGIIAGIGKVSGVECMIVANDPTVKGGSYYPITIKKHLRAQEIATENNLPCIYLVDSGGANLPRQTEVFPDKEHFGRIFYNQANMSAKKIPQIAVVLGSCTAGGAYIPAMADESIIVRNQGTVFLAGPPLVKAALGEEVTAEQLGGADLHCRKSGVTDHYAVDDFHALHLARQCIKNINYQKENQVVTQDPNEPAYPIEDLYGIVGANLKRSFDVREVIARIVDSSEFDEFKALYGETVVTGFARIHGYPVGIIGNNGVLHSESALKASHFIELCCQRKIPLVFLQNITGFMVGKDAEAGGIAKNGAKMVTAVACANVPKFTVIIGGSYGAGNYGMCGRAYNPRFLFMWPNARISVMGGEQAGTVLSTVKKAQLMKQGQEITPEIEAKIDAELKAPLVKQFDKEGHPYFASARLWDDGVIDPKDTRTVLGLAVSASLNAKIQPTKFGVFRM 567
            + YH  S A  L +  +  +A ++EN  QM  LV  L      IK GGGEKA+  H+SR KLLPRERI +++DPGSPFLELSQ AGY LY  EEVP GGII GIG+VSGVECMI+AND TVKGG+YYP+T+KK LRAQEIA +N LPCIYLVDSGGA LPRQ +VFPD++HFGR FYNQA MS+K I QIAVV+GSCTAGGAY+PAMADE+IIVR QGT+FLAGPPLVKAA GEEV+AE LGGADLHCRKSGV+DH+A+DD HALHL R+ ++N+NYQK+  V  +   EP +P ++LYGIVGANLKRSFDVREVIARIVD S F EFKA YG+T+VTGFARI GYPVGI+GNNGVL SESA K +HF++LCCQR IPL+FLQNITGFMVG++ EA GIAK+GAKMV AVACA VPK T+IIGGSYGAGNYGMCGRAY+PRFL++WPNARISVMGGEQA  VL+T+ K Q  ++G++ +   EA     LK P++K+F++EG+PY++SAR+WDDG+IDP DTR VLGL+ SA+LNA I+ T FG+FRM
Sbjct:   21 RAYHGDSVAS-LGTQPDLGSALYQENYKQMKALVNQLHERVEHIKLGGGEKARALHISRGKLLPRERIDNLIDPGSPFLELSQFAGYQLYDNEEVPGGGIITGIGRVSGVECMIIANDATVKGGAYYPVTVKKQLRAQEIAMQNRLPCIYLVDSGGAYLPRQADVFPDRDHFGRTFYNQAIMSSKNIAQIAVVMGSCTAGGAYVPAMADENIIVRKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRKSGVSDHWALDDHHALHLTRKVVRNLNYQKKLDVTIEPSEEPLFPADELYGIVGANLKRSFDVREVIARIVDGSRFTEFKAFYGDTLVTGFARIFGYPVGIVGNNGVLFSESAKKGTHFVQLCCQRNIPLLFLQNITGFMVGREYEAEGIAKDGAKMVAAVACAQVPKITLIIGGSYGAGNYGMCGRAYSPRFLYIWPNARISVMGGEQAANVLATITKDQRAREGKQFSSADEAA----LKEPIIKKFEEEGNPYYSSARVWDDGIIDPADTRLVLGLSFSAALNAPIEKTDFGIFRM 563

The following BLAST results are available for this feature:

BLAST of TCONS_00073647-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00073647-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MCCB	0.000e+0	69.16	Methylcrotonoyl-CoA carboxylase beta chain, mitoch...	[more]

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TCONS_00073647-protein (polypeptide) - C. hemisphaerica