TCONS_00073670-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073670-protein
Unique NameTCONS_00073670-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length500

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073670-protein ID=TCONS_00073670-protein|Name=TCONS_00073670-protein|organism=Clytia hemisphaerica|type=polypeptide|length=500bp
YSSRVSELASSTSYKYDLTQTRLPSDYLPIESTNQLVSSSPEFHQTYMVT
TTESPTNSHLRPSSSVDNHITKIMSTPITNTDVLPSIETPFSPNTDLYTS
LLSSSISTSKETSSMENGVFESTFFYKESSNILESSLEMKSSALPIDPTD
SLHLSMTSIVQETIPSWSTGGSLATSFLEETSILPTKSIPIDFPSSSVVV
PTRRPHINLTCDDQPCNGYPCSNVSDNGLMFRCQCPFPTVSPRCSIASVI
HFPRFNGHSYLELPPITMTTKQNTIHIIFHTINKEGLLLYAFHQNFKDHL
EIFIQNGKLAVSLSTGDTAAMVTTHQRIDNGQTIASSIKIDAAARLVTIS
IENGETVSKAISSSLKSVQLTSSWFLGGTPDDVYTESGITKFNGCVKEFT
VNSKPYRLADPSFARNWTNIGECDISLCERHICRNNATCFPDYSDLDNYQ
CQCAPGYHGRTCQNKITDFCVGDPCHGGECVWTANGRKCFCQYGRVGDNC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045747XLOC_045747Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073670TCONS_00073670Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
IPR001791Laminin_G
IPR013032EGF-like_CS
IPR013320ConA-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000742EGF-like domainSMARTSM00181egf_5coord: 469..500
e-value: 110.0
score: 4.0
coord: 427..463
e-value: 1.0E-5
score: 35.0
coord: 210..245
e-value: 89.0
score: 5.2
IPR000742EGF-like domainPFAMPF00008EGFcoord: 432..461
e-value: 1.2E-4
score: 22.2
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 212..245
score: 6.712
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 466..500
score: 7.541
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 424..463
score: 20.153
IPR001791Laminin G domainSMARTSM00282LamG_3coord: 271..404
e-value: 2.3E-13
score: 60.4
IPR001791Laminin G domainPFAMPF00054Laminin_G_1coord: 279..406
e-value: 3.8E-17
score: 62.6
IPR001791Laminin G domainPROSITEPS50025LAM_G_DOMAINcoord: 250..423
score: 27.673
NoneNo IPR availableGENE3D2.10.25.10coord: 471..500
e-value: 0.0081
score: 15.5
NoneNo IPR availableGENE3D2.60.120.200coord: 453..470
e-value: 0.2
score: 10.6
coord: 228..422
e-value: 3.4E-32
score: 111.1
NoneNo IPR availableGENE3D2.10.25.10coord: 423..452
e-value: 2.8E-10
score: 39.8
NoneNo IPR availableCDDcd00110LamGcoord: 254..402
e-value: 1.37611E-23
score: 95.5628
NoneNo IPR availableCDDcd00054EGF_CAcoord: 419..463
e-value: 1.60478E-6
score: 44.1646
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 432..466
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 467..500
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 489..500
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 451..462
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 451..462
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 232..418

Blast
[Close]
BLAST of TCONS_00073670-protein vs. Swiss-Prot (Human)
Match: EYS (Protein eyes shut homolog OS=Homo sapiens GN=EYS PE=1 SV=5)

HSP 1 Score: 108.612 bits (270), Expect = 1.117e-24
Identity = 90/314 (28.66%), Postives = 137/314 (43.63%), Query Frame = 0 
Query:  210 TCDDQPC-NGYPCSNV--SDNGLMFRCQCPFPTVSPRCSIASVIHFPRFNGHSYLELPPITMTTKQN-----TIHIIFHTINKEGLLLYAFHQNF-KDHLEIFIQNGKLAVSLSTGDTAAMVTTHQRIDNGQTIASSIKID--------AAARLVTISIENGETVSKAISS-SLKSVQLTSSWFLGGTPDDV--YTESG-ITKFNGCVKEFTVNSKPYRLADPSFARNWTNIGECDISLCERHICRNNATCFPDYSDLDNYQCQCAPGYHGRTCQNKITDFCVGDPCHGGECVWTANGRK--CFCQYGRVGDNC 500
             C    C NG  C  +  S   + F+C CP       C   + + FP FNG+SYLELP +    ++      TI++   T +  G +LY+   N  K  L +F+  G+ +V    G++  ++T            + I I             ++ ++ +    V K  +  S  S     S FLG  P +V  + ++G +  F GC+ +  VN+K + + D   AR+  NI  C +  C  H+CRNN TC    SD +N  C+C   Y G+ CQ      C  +PC  G      +G    C C YGR G  C
Sbjct: 2102 VCQQDVCHNGGTCHAIFLSSGIVSFQCDCPLHFTGRFCEKDAGLFFPSFNGNSYLELPFLKFVLEKEHNRTVTIYLTIKTNSLNGTILYSNGNNCGKQFLHLFLVEGRPSVKYGCGNSQNILTVSANYSINTNAFTPITIRYTTPVGSPGVVCMIEMTADGKPPVQKKDTEISHASQAYFESMFLGHIPANVQIHKKAGPVYGFRGCILDLQVNNKEFFIIDE--ARHGKNIENCHVPWCAHHLCRNNGTCI---SDNENLFCECPRLYSGKLCQFAS---CENNPCGNGATCVPKSGTDIVCLCPYGRSGPLC 2407
The following BLAST results are available for this feature:
BLAST of TCONS_00073670-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EYS1.117e-2428.66Protein eyes shut homolog OS=Homo sapiens GN=EYS P... [more]
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