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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000297 ID=TCONS_00000297|Name=TCONS_00000297|organism=Clytia hemisphaerica|type=transcript|length=1245bp
cgcttatcaaataaaagttaaaccacgatttaacctgtgttaaatccaaa
tttgggtgaaaagtAATATTATATTCTATCAAATGATAATTTGAAGTTTA
AATATTTAGAACtcatttttcattgaaagtGACACAAGTGTGTtcgaaaa
tttgatttgattgtcatTTTTCAACGAATACTTCAATATTAACAAATAAt
acaccgttgaaaagataattgagAGCACtataatttcaatttgttttaaT
CAAGAATTAACTCCACCAAAATAGTCAAAGAAACTCTATGCTGtaacaac
aaaaaataataatatataaTGCGAATAAAATAACCCTCCGTGCCTGCACA
tacctaaataaaaaattaccaaaTTCTTCCGTTTATTATTAATAATAAAA
TTTACATCTAACGAATAAGACTtctatgtatgtgtgtttgtgtGAACTTG
ATACAGGCGttcaataaatattaaaaaaataaattcagttTTCCCCTAAA
ACTAATAAATGGTCTCCTAGACTTTGATTTGAGATTTGAATACACTGAAT
AGCAAGAGCAGAACCCCATTCCATTCAATTTCCTTTGCCATGCTATTTTC
TTGCTTTCCAAATCTATACGTACTCTTAAGTTCCAAATAACTCCCcgttt
ttcaacgttcatttaacgctTTAATAACTTTTGGGGGGATCTAATTGCCG
GGGAGGGGGacgttggaaattgtacttctgaaaacccaaaaataagatAA
GCATATACTAAAATCAGGCTatatagagcaaaataaggggccttctcttt
gacagctgaaaatattaaatataaaaaaacgggggggggggtcctaataa
ggtccggggtgctgaaaattttcgaaaaaatttatttggaacGTAAGAGT
GAGTAAACTCAAGTTGAGaagcattttttgaaagataattTGTCATTGAT
AAAAAACGAACATAAGATCTTGTCACTATTTTTGCTTGTGTACAATTGAG
AGTATCGCAAATAGTAAGGTACTGTTCAAAAATAGCAGAAATGTGTCCTA
CCTTCCAAAAAGCCTCATATGAAGCGCTATATGAActttgaaaaaacgtt
gtgagCTGCCTTAGGAGTAGTAAAAAAACAACAGATCTTTAGACACGAAT
AGTACCAGTAGTACTGCCAGTAATACTTCTACTACCAAAAGAAACTAAAT
CACATatactaaaaatgaaagtttctttttcaaaaccccCTATAA Run BLAST on NCBI transcript from alignment at sc0000001:805115..806359 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000297 ID=TCONS_00000297|Name=TCONS_00000297|organism=Clytia hemisphaerica|type=transcript|length=1245bp|location=Sequence derived from alignment at sc0000001:805115..806359 (Clytia hemisphaerica)
TTATAGggggttttgaaaaagaaactttcatttttagtatATGTGATTTA
GTTTCTTTTGGTAGTAGAAGTATTACTGGCAGTACTACTGGTACTATTCG
TGTCTAAAGATCTGTTGTTTTTTTACTACTCCTAAGGCAGctcacaacgt
tttttcaaagTTCATATAGCGCTTCATATGAGGCTTTTTGGAAGGTAGGA
CACATTTCTGCTATTTTTGAACAGTACCTTACTATTTGCGATACTCTCAA
TTGTACACAAGCAAAAATAGTGACAAGATCTTATGTTCGTTTTTTATCAA
TGACAaattatctttcaaaaaatgcttCTCAACTTGAGTTTACTCACTCT
TACgttccaaataaattttttcgaaaattttcagcaccccggaccttatt
aggacccccccccccgtttttttatatttaatattttcagctgtcaaaga
gaaggccccttattttgctctatatAGCCTGATTTTAGTATATGCTTatc
ttatttttgggttttcagaagtacaatttccaacgtCCCCCTCCCCGGCA
ATTAGATCCCCCCAAAAGTTATTAAagcgttaaatgaacgttgaaaaacg
GGGAGTTATTTGGAACTTAAGAGTACGTATAGATTTGGAAAGCAAGAAAA
TAGCATGGCAAAGGAAATTGAATGGAATGGGGTTCTGCTCTTGCTATTCA
GTGTATTCAAATCTCAAATCAAAGTCTAGGAGACCATTTATTAGTTTTAG
GGGAAaactgaatttatttttttaatatttattgaaCGCCTGTATCAAGT
TCacacaaacacacatacatagaAGTCTTATTCGTTAGATGTAAATTTTA
TTATTAATAATAAACGGAAGAAtttggtaattttttatttaggtaTGTGC
AGGCACGGAGGGTTATTTTATTCGCAttatatattattattttttgttgt
taCAGCATAGAGTTTCTTTGACTATTTTGGTGGAGTTAATTCTTGAttaa
aacaaattgaaattataGTGCTctcaattatcttttcaacggtgtaTTAT
TTGTTAATATTGAAGTATTCGTTGAAAAatgacaatcaaatcaaattttc
gaACACACTTGTGTCactttcaatgaaaaatgaGTTCTAAATATTTAAAC
TTCAAATTATCATTTGATAGAATATAATATTacttttcacccaaatttgg
atttaacacaggttaaatcgtggtttaacttttatttgataagcg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000297-exon-sc0000001-1491911889:805115..806359 | TCONS_00000297-exon-sc0000001-1491911889:805115..806359 | Clytia hemisphaerica | exon |
| TCONS_00000297-exon-sc0000001-1510915933:805115..806359 | TCONS_00000297-exon-sc0000001-1510915933:805115..806359 | Clytia hemisphaerica | exon |
| TCONS_00000297-exon-sc0000001-1575043694:805115..806359 | TCONS_00000297-exon-sc0000001-1575043694:805115..806359 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:805115..806359 . |
Blast
The following BLAST results are available for this feature:
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