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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000374 ID=TCONS_00000374|Name=TCONS_00000374|organism=Clytia hemisphaerica|type=transcript|length=3020bp
GTTTGAAcattttgagtgtatttttcattagaaatattttatcaatctta
aaaatttcttttccatATACAacataaataatttttaaagataaGATTCT
GGCATTTCATCAAGGCTGTCGAAATCATAGTCTTTGTAGTTTTGTCTTTT
ATCCATCGAAGAAATCTCATCAGAAACCTCATAACCGATACATGAAGACC
TGCTGGAGTCTTCAAGATCCCTGTTATCTGAAGTTTGTGTTGAAATGTTT
TTAGAAGTTGACAGGTGCCTTGTCAAAGAATGCTTTTCCAGTTTTGCCAA
CAAATAGCAGAATTGCTCTTGGACATCTGAGGAGCCGTCAAGATACCAAG
AATCTCGGAGATTTTCTATTTCTTCCAGCATTTTATCTAATTCTTCATTG
TCACTATCATTTGCGCATGCGCGAGTTTCCTGTCCGGGATTGTGTCTGAA
ATCGTTTGCGCATGCTCTAGAATCATTAATGAGATTGTCACTACACGACT
GAGATTCTTCCATATTATCACAGTCAATTTCTGTATTTGAGCAACGTCTA
ATATTTTGTTTCGAATCTGAATTTTCCAAAGTTGACGATAACTTTGGATA
TTCAACAATTTCAGCTTTATTATCGGAGGTTTTTGATAAATCACCCAGTA
GATTTCTTTTCAAGtcaattaaattttcattaCTGGAGCTGAGATTAATG
TGAACATCTTCATAGCTACCGTCTTTGAGATCAAAACTTCGATTATTATA
CCACGTTGGTTGTTCAGTAGTGGTGCAATCATTATCAAGACTGTTAGTAC
TTTCAGCGAAAGATTGTTGCGAATAACAAGACGATCTTTTACAGTTCGTT
TCACTATCGATGTACGAGTTCCTGTGGAACCCTCCGAAGGTTTTACTATG
AGTTATGCCGCTGTTTCTCTTTAATGAATCATGACTAAGCAGACTGCTTC
GTTCAGAATGACTTGAGACTTCAGATTCTTCTGAANCTAAGCAGACTGCT
TCGCTCAGAATGACTTGAGACTTCAGATTCTTCtgaaatttgatcaaaac
aaGATTTCTGTCCATTATTATGTGTTTCAAAGCTCCCCGAATCAGTCATA
TTGAAAATACCTGTTTTTCTACGCCTCGAAGTTACTGCCTTAGTTGGCAG
TGTattgttattcaaaatttcagtAACACTCGATCTTGGAGATACTCTAC
TTGTTAGAAGATTCAGTTTATCTTTCAAGCTTGAACTGTTAACTCGCGTT
GGTGGAAGTACTGAGAAACTATCATCAAAGATGAACGCTTTTGGATTTTG
GATTTGTGCTGGTACTGAATGTTTACGTATTCTGGCTTTATCTTCATGAT
TTATACTGGTACTGGCTGCTAAGGCGGGTAACGTTAACTTACGTTGCCGA
TCCTGTACCAGAGCTTGGGAAATCTTACGATGTCGTCTCTCTTTCTTTTC
TTGATCACTCATATTCGAAATGGTTGATAATTTACGGAACGGATTTGACG
TGACTGAGAATTTGAACTTAACACGTTTTGTTGACATTGGAGGTGAGGAA
ACCGGCGTTTGATCTTTATCCGTCGCAACGCTCCATTCGTCCTCTTCTTC
TGCCTCTTCATAAATAGAATCAAGAGATCCGGCACTTATAACGTTGACCG
GGTTTCGAGTGATAATTCCTTCCCGGAATAAATCTGGATGTCCTGTCAGT
CCGGGTGAACATGGAGGAGCTAATGTTGTTGAAGTGTTGTTATTTTCCTC
TGAATGAGAGCACAAAAATAAACGTTTATAAGCTCTCAAGAAGTATTTGT
TTAATCCACCATAAATGAATGGGTTCATGATATAGTTCAAGTAATGGAAG
ATAACAAATGTTGAGGTAACACTTTCTGAGAATTTAGCTCCTTGTTTGAA
ACTATAAACAAGCCATATAATTTGATTAGGTAACGAGCTGATTGCAAAGA
TCACGATGATGAGAAGGAACATGAAAAATGTTCGGATCGTTTGCCGTCGG
CGACCGTTTGCGATGAAATAATCGGCATTATCGTATGACGAGGACGCCGA
AGACGAAGTCCGTTTATAATAGTTGCTAACACGGAACATCTTCAAGCAAA
ACATCAAACACATGTCCTTAGCTTCTCCCGAATAAGTTGTCGATAAAATC
GATTCTGTTCGACCTCGTTTGGCGAATCGTGCACGTATTTCTTCCTCGTT
GTTCAATCTTAACGACATTGATCGAGCAGTACGCGCTTCTTCTGATAAAC
GAATCGTATGGTCATTCTGTCTTTTAAGGTGGATCCAGGCGCTTGTATAA
AAGAACATCATTAATGCAAGGGGTAGTAAATATTGTAATAAAAACAAGAG
TATTGTATAGAATTTTGCTGTACCGGTATCCCAAATCTCTGCACAGTATC
GTAGCTCCGTCCCAGGGATAACTGCGAGTCTAATATGAACTGCGTAAGGA
ATAATAGTGACGTAACCATACACATGATTTGCAAATATCATTTTTAAAGT
ATGTTTTTGACAAGATCTCCAAGTCATCGGGTGGACTATAGCAATCCATC
GCTCGATTGTTATAGTCAGTAACGAGGATACTGAAACATTCACAGCCCAC
GTGGCAAATGGATAGATAAGTTGACATCCAAGTTCACCAAATATAAAATC
ATGATGGTGTCTTTTAGTTAACAGTTGGAACGGAATCGAAAATACTACAA
CACAAATATTGCAGAATGATAAATTGAGGACCAGATAATTCAAAGATGTT
TGAAGACGTTTATCGAATATGATTGCACTGATGACGACAAGGTTACCAAG
GAAACCAACGATGCAGATGATGATTTGTGGTATATCCTTAGCTTCAACTG
GTAACAAATCTGTAGGTTTTATTGTTGTGTTGTTACTCATGTTTCCAAGA
CGATGTTGTTGAATTTGTCAGTATGCTTTGGAATCAAACGGTTTATAGTG
TCTTCTCATTGCAGTTCAGTTGTGGTTAGATGttgacattttcatttttc
aatacttatttcgttttttt Run BLAST on NCBI protein sequence of TCONS_00000374-protein >TCONS_00000374-protein ID=TCONS_00000374-protein|Name=TCONS_00000374-protein|organism=Clytia hemisphaerica|type=polypeptide|length=639bp
MSNNTTIKPTDLLPVEAKDIPQIIICIVGFLGNLVVISAIIFDKRLQTSL
NYLVLNLSFCNICVVVFSIPFQLLTKRHHHDFIFGELGCQLIYPFATWAV
NVSVSSLLTITIERWIAIVHPMTWRSCQKHTLKMIFANHVYGYVTIIPYA
VHIRLAVIPGTELRYCAEIWDTGTAKFYTILLFLLQYLLPLALMMFFYTS
AWIHLKRQNDHTIRLSEEARTARSMSLRLNNEEEIRARFAKRGRTESILS
TTYSGEAKDMCLMFCLKMFRVSNYYKRTSSSASSSYDNADYFIANGRRRQ
TIRTFFMFLLIIVIFAISSLPNQIIWLVYSFKQGAKFSESVTSTFVIFHY
LNYIMNPFIYGGLNKYFLRAYKRLFLCSHSEENNNTSTTLAPPCSPGLTG
HPDLFREGIITRNPVNVISAGSLDSIYEEAEEEDEWSVATDKDQTPVSSP
PMSTKRVKFKFSVTSNPFRKLSTISNMSDQEKKERRHRKISQALVQDRQR
KLTLPALAASTSINHEDKARIRKHSVPAQIQNPKAFIFDDSFSVLPPTRV
NSSSLKDKLNLLTSRVSPRSSVTEILNNNTLPTKAVTSRRRKTGIFNMTD
SGSFETHNNGQKSCFDQISEESEVSSHSERSSLLXFRRI Run BLAST on NCBI transcript from alignment at sc0000001:2332355..2335374 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000374 ID=TCONS_00000374|Name=TCONS_00000374|organism=Clytia hemisphaerica|type=transcript|length=3020bp|location=Sequence derived from alignment at sc0000001:2332355..2335374 (Clytia hemisphaerica)
aaaaaaacgaaataagtattgaaaaatgaaaatgtcaaCATCTAACCACA
ACTGAACTGCAATGAGAAGACACTATAAACCGTTTGATTCCAAAGCATAC
TGACAAATTCAACAACATCGTCTTGGAAACATGAGTAACAACACAACAAT
AAAACCTACAGATTTGTTACCAGTTGAAGCTAAGGATATACCACAAATCA
TCATCTGCATCGTTGGTTTCCTTGGTAACCTTGTCGTCATCAGTGCAATC
ATATTCGATAAACGTCTTCAAACATCTTTGAATTATCTGGTCCTCAATTT
ATCATTCTGCAATATTTGTGTTGTAGTATTTTCGATTCCGTTCCAACTGT
TAACTAAAAGACACCATCATGATTTTATATTTGGTGAACTTGGATGTCAA
CTTATCTATCCATTTGCCACGTGGGCTGTGAATGTTTCAGTATCCTCGTT
ACTGACTATAACAATCGAGCGATGGATTGCTATAGTCCACCCGATGACTT
GGAGATCTTGTCAAAAACATACTTTAAAAATGATATTTGCAAATCATGTG
TATGGTTACGTCACTATTATTCCTTACGCAGTTCATATTAGACTCGCAGT
TATCCCTGGGACGGAGCTACGATACTGTGCAGAGATTTGGGATACCGGTA
CAGCAAAATTCTATACAATACTCTTGTTTTTATTACAATATTTACTACCC
CTTGCATTAATGATGTTCTTTTATACAAGCGCCTGGATCCACCTTAAAAG
ACAGAATGACCATACGATTCGTTTATCAGAAGAAGCGCGTACTGCTCGAT
CAATGTCGTTAAGATTGAACAACGAGGAAGAAATACGTGCACGATTCGCC
AAACGAGGTCGAACAGAATCGATTTTATCGACAACTTATTCGGGAGAAGC
TAAGGACATGTGTTTGATGTTTTGCTTGAAGATGTTCCGTGTTAGCAACT
ATTATAAACGGACTTCGTCTTCGGCGTCCTCGTCATACGATAATGCCGAT
TATTTCATCGCAAACGGTCGCCGACGGCAAACGATCCGAACATTTTTCAT
GTTCCTTCTCATCATCGTGATCTTTGCAATCAGCTCGTTACCTAATCAAA
TTATATGGCTTGTTTATAGTTTCAAACAAGGAGCTAAATTCTCAGAAAGT
GTTACCTCAACATTTGTTATCTTCCATTACTTGAACTATATCATGAACCC
ATTCATTTATGGTGGATTAAACAAATACTTCTTGAGAGCTTATAAACGTT
TATTTTTGTGCTCTCATTCAGAGGAAAATAACAACACTTCAACAACATTA
GCTCCTCCATGTTCACCCGGACTGACAGGACATCCAGATTTATTCCGGGA
AGGAATTATCACTCGAAACCCGGTCAACGTTATAAGTGCCGGATCTCTTG
ATTCTATTTATGAAGAGGCAGAAGAAGAGGACGAATGGAGCGTTGCGACG
GATAAAGATCAAACGCCGGTTTCCTCACCTCCAATGTCAACAAAACGTGT
TAAGTTCAAATTCTCAGTCACGTCAAATCCGTTCCGTAAATTATCAACCA
TTTCGAATATGAGTGATCAAGAAAAGAAAGAGAGACGACATCGTAAGATT
TCCCAAGCTCTGGTACAGGATCGGCAACGTAAGTTAACGTTACCCGCCTT
AGCAGCCAGTACCAGTATAAATCATGAAGATAAAGCCAGAATACGTAAAC
ATTCAGTACCAGCACAAATCCAAAATCCAAAAGCGTTCATCTTTGATGAT
AGTTTCTCAGTACTTCCACCAACGCGAGTTAACAGTTCAAGCTTGAAAGA
TAAACTGAATCTTCTAACAAGTAGAGTATCTCCAAGATCGAGTGTTactg
aaattttgaataacaatACACTGCCAACTAAGGCAGTAACTTCGAGGCGT
AGAAAAACAGGTATTTTCAATATGACTGATTCGGGGAGCTTTGAAACACA
TAATAATGGACAGAAATCttgttttgatcaaatttcaGAAGAATCTGAAG
TCTCAAGTCATTCTGAGCGAAGCAGTCTGCTTAGNTTCAGAAGAATCTGA
AGTCTCAAGTCATTCTGAACGAAGCAGTCTGCTTAGTCATGATTCATTAA
AGAGAAACAGCGGCATAACTCATAGTAAAACCTTCGGAGGGTTCCACAGG
AACTCGTACATCGATAGTGAAACGAACTGTAAAAGATCGTCTTGTTATTC
GCAACAATCTTTCGCTGAAAGTACTAACAGTCTTGATAATGATTGCACCA
CTACTGAACAACCAACGTGGTATAATAATCGAAGTTTTGATCTCAAAGAC
GGTAGCTATGAAGATGTTCACATTAATCTCAGCTCCAGtaatgaaaattt
aattgaCTTGAAAAGAAATCTACTGGGTGATTTATCAAAAACCTCCGATA
ATAAAGCTGAAATTGTTGAATATCCAAAGTTATCGTCAACTTTGGAAAAT
TCAGATTCGAAACAAAATATTAGACGTTGCTCAAATACAGAAATTGACTG
TGATAATATGGAAGAATCTCAGTCGTGTAGTGACAATCTCATTAATGATT
CTAGAGCATGCGCAAACGATTTCAGACACAATCCCGGACAGGAAACTCGC
GCATGCGCAAATGATAGTGACAATGAAGAATTAGATAAAATGCTGGAAGA
AATAGAAAATCTCCGAGATTCTTGGTATCTTGACGGCTCCTCAGATGTCC
AAGAGCAATTCTGCTATTTGTTGGCAAAACTGGAAAAGCATTCTTTGACA
AGGCACCTGTCAACTTCTAAAAACATTTCAACACAAACTTCAGATAACAG
GGATCTTGAAGACTCCAGCAGGTCTTCATGTATCGGTTATGAGGTTTCTG
ATGAGATTTCTTCGATGGATAAAAGACAAAACTACAAAGACTATGATTTC
GACAGCCTTGATGAAATGCCAGAATCttatctttaaaaattatttatgtT
GTATatggaaaagaaatttttaagattgataaaatatttctaatgaaaaa
tacactcaaaatgTTCAAAC Coding sequence (CDS) from alignment at sc0000001:2332355..2335374 >TCONS_00000374 ID=TCONS_00000374|Name=TCONS_00000374|organism=Clytia hemisphaerica|type=CDS|length=1920bp|location=Sequence derived from alignment at sc0000001:2332355..2335374 (Clytia hemisphaerica)
ATGAGTAACAACACAACAATAAAACCTACAGATTTGTTACCAGTTGAAGC
TAAGGATATACCACAAATCATCATCTGCATCGTTGGTTTCCTTGGTAACC
TTGTCGTCATCAGTGCAATCATATTCGATAAACGTCTTCAAACATCTTTG
AATTATCTGGTCCTCAATTTATCATTCTGCAATATTTGTGTTGTAGTATT
TTCGATTCCGTTCCAACTGTTAACTAAAAGACACCATCATGATTTTATAT
TTGGTGAACTTGGATGTCAACTTATCTATCCATTTGCCACGTGGGCTGTG
AATGTTTCAGTATCCTCGTTACTGACTATAACAATCGAGCGATGGATTGC
TATAGTCCACCCGATGACTTGGAGATCTTGTCAAAAACATACTTTAAAAA
TGATATTTGCAAATCATGTGTATGGTTACGTCACTATTATTCCTTACGCA
GTTCATATTAGACTCGCAGTTATCCCTGGGACGGAGCTACGATACTGTGC
AGAGATTTGGGATACCGGTACAGCAAAATTCTATACAATACTCTTGTTTT
TATTACAATATTTACTACCCCTTGCATTAATGATGTTCTTTTATACAAGC
GCCTGGATCCACCTTAAAAGACAGAATGACCATACGATTCGTTTATCAGA
AGAAGCGCGTACTGCTCGATCAATGTCGTTAAGATTGAACAACGAGGAAG
AAATACGTGCACGATTCGCCAAACGAGGTCGAACAGAATCGATTTTATCG
ACAACTTATTCGGGAGAAGCTAAGGACATGTGTTTGATGTTTTGCTTGAA
GATGTTCCGTGTTAGCAACTATTATAAACGGACTTCGTCTTCGGCGTCCT
CGTCATACGATAATGCCGATTATTTCATCGCAAACGGTCGCCGACGGCAA
ACGATCCGAACATTTTTCATGTTCCTTCTCATCATCGTGATCTTTGCAAT
CAGCTCGTTACCTAATCAAATTATATGGCTTGTTTATAGTTTCAAACAAG
GAGCTAAATTCTCAGAAAGTGTTACCTCAACATTTGTTATCTTCCATTAC
TTGAACTATATCATGAACCCATTCATTTATGGTGGATTAAACAAATACTT
CTTGAGAGCTTATAAACGTTTATTTTTGTGCTCTCATTCAGAGGAAAATA
ACAACACTTCAACAACATTAGCTCCTCCATGTTCACCCGGACTGACAGGA
CATCCAGATTTATTCCGGGAAGGAATTATCACTCGAAACCCGGTCAACGT
TATAAGTGCCGGATCTCTTGATTCTATTTATGAAGAGGCAGAAGAAGAGG
ACGAATGGAGCGTTGCGACGGATAAAGATCAAACGCCGGTTTCCTCACCT
CCAATGTCAACAAAACGTGTTAAGTTCAAATTCTCAGTCACGTCAAATCC
GTTCCGTAAATTATCAACCATTTCGAATATGAGTGATCAAGAAAAGAAAG
AGAGACGACATCGTAAGATTTCCCAAGCTCTGGTACAGGATCGGCAACGT
AAGTTAACGTTACCCGCCTTAGCAGCCAGTACCAGTATAAATCATGAAGA
TAAAGCCAGAATACGTAAACATTCAGTACCAGCACAAATCCAAAATCCAA
AAGCGTTCATCTTTGATGATAGTTTCTCAGTACTTCCACCAACGCGAGTT
AACAGTTCAAGCTTGAAAGATAAACTGAATCTTCTAACAAGTAGAGTATC
TCCAAGATCGAGTGTTactgaaattttgaataacaatACACTGCCAACTA
AGGCAGTAACTTCGAGGCGTAGAAAAACAGGTATTTTCAATATGACTGAT
TCGGGGAGCTTTGAAACACATAATAATGGACAGAAATCttgttttgatca
aatttcaGAAGAATCTGAAGTCTCAAGTCATTCTGAGCGAAGCAGTCTGC
TTAGNTTCAGAAGAATCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000374-exon-sc0000001-1491911889:2332355..2335374 | TCONS_00000374-exon-sc0000001-1491911889:2332355..2335374 | Clytia hemisphaerica | exon |
| TCONS_00000374-exon-sc0000001-1510915933:2332355..2335374 | TCONS_00000374-exon-sc0000001-1510915933:2332355..2335374 | Clytia hemisphaerica | exon |
| TCONS_00000374-exon-sc0000001-1575043694:2332355..2335374 | TCONS_00000374-exon-sc0000001-1575043694:2332355..2335374 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001 | supercontig | sc0000001:2332355..2335374 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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